KEGG   PATHWAY: ppun00010
Entry
ppun00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas putida NBRC 14164
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ppun00010  Glycolysis / Gluconeogenesis
ppun00010

Module
ppun_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ppun00010]
ppun_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppun00010]
ppun_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppun00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas putida NBRC 14164 [GN:ppun]
Gene
PP4_43050  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
PP4_46800  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PP4_51070  fbp; fructose-1,6-bisphosphatase class I [KO:K03841] [EC:3.1.3.11]
PP4_50250  fda; fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
PP4_46960  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
PP4_37000  putative glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
PP4_43070  gap; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
PP4_50280  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PP4_51200  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
PP4_41560  eno; enolase [KO:K01689] [EC:4.2.1.11]
PP4_09090  pykA; pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
PP4_14650  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PP4_37670  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
PP4_03690  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
PP4_06250  acoC; acetoin dehydrogenase E2 component [KO:K00627] [EC:2.3.1.12]
PP4_03680  aceF; pyruvate dehydrogenase E2 component [KO:K00627] [EC:2.3.1.12]
PP4_54290  lpd; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PP4_15710  lpd; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PP4_13570  bkdC; dihydrolipoyl dehydrogenase BkdC [KO:K00382] [EC:1.8.1.4]
PP4_41520  adhC; alcohol dehydrogenase class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PP4_18430  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
PP4_33760  putative NADP-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
PP4_31590  pedH; PQQ-dependent alcohol dehydrogenase PedH [KO:K00114] [EC:1.1.2.8]
PP4_31640  pedE; PQQ-dependent alcohol dehydrogenase PedE [KO:K00114] [EC:1.1.2.8]
PP4_22070  putative cytochrome c [KO:K22474] [EC:1.1.5.5]
PP4_27710  gadA; putative gluconate 2-dehydrogenase cytochrome c subunit [KO:K22474] [EC:1.1.5.5]
PP4_48050  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
PP4_20800  yfmT; putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
PP4_21020  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
PP4_31580  pedI; aldehyde dehydrogenase PedI [KO:K00138] [EC:1.2.1.-]
PP4_06170  hdhA; hydrazone dehydrogenase [KO:K00138] [EC:1.2.1.-]
PP4_36020  putative acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PP4_13330  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PP4_46810  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PP4_20980  hypothetical protein [KO:K24012] [EC:6.2.1.13]
PP4_11110  putative aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
PP4_22480  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
PP4_53510  algC; phosphomannomutase/phosphoglucomutase AlgC [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PP4_53930  putative aldose 1-epimerase [KO:K01792] [EC:5.1.3.15]
PP4_28550  putative aldehyde dehydrogenase [KO:K00131] [EC:1.2.1.9]
PP4_02720  ppcK; phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ppun00020  Citrate cycle (TCA cycle)
ppun00030  Pentose phosphate pathway
ppun00500  Starch and sucrose metabolism
ppun00620  Pyruvate metabolism
ppun00640  Propanoate metabolism
ppun00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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