KEGG   PATHWAY: prop00630
Entry
prop00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Propionimicrobium sp. PCR01-08-3
Class
Metabolism; Carbohydrate metabolism
Pathway map
prop00630  Glyoxylate and dicarboxylate metabolism
prop00630

Module
prop_M00621  Glycine cleavage system [PATH:prop00630]
Other DBs
GO: 0046487 0043648
Organism
Propionimicrobium sp. PCR01-08-3 [GN:prop]
Gene
QQ658_07955  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
QQ658_02645  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
QQ658_09835  citrate synthase [KO:K01647] [EC:2.3.3.1]
QQ658_14595  citrate synthase [KO:K01647] [EC:2.3.3.1]
QQ658_07550  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
QQ658_11930  thiolase family protein [KO:K00626] [EC:2.3.1.9]
QQ658_08415  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
QQ658_05660  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
QQ658_02775  biotin carboxylase N-terminal domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
QQ658_02800  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
QQ658_09855  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
QQ658_09860  mutA; methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
QQ658_13330  FAD-linked oxidase C-terminal domain-containing protein [KO:K00104] [EC:1.1.99.14]
QQ658_13180  catalase [KO:K03781] [EC:1.11.1.6]
QQ658_09340  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
QQ658_09485  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
QQ658_00340  glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
QQ658_07000  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
QQ658_09155  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
QQ658_07275  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
QQ658_12485  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
QQ658_06975  gcvH; glycine cleavage system protein GcvH [KO:K02437]
QQ658_10275  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
QQ658_08970  glycerate kinase [KO:K00865] [EC:2.7.1.165]
QQ658_00040  hypothetical protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
QQ658_14990  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
QQ658_05510  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
QQ658_02655  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
prop00010  Glycolysis / Gluconeogenesis
prop00020  Citrate cycle (TCA cycle)
prop00030  Pentose phosphate pathway
prop00053  Ascorbate and aldarate metabolism
prop00071  Fatty acid degradation
prop00230  Purine metabolism
prop00250  Alanine, aspartate and glutamate metabolism
prop00260  Glycine, serine and threonine metabolism
prop00620  Pyruvate metabolism
prop00710  Carbon fixation by Calvin cycle
prop00750  Vitamin B6 metabolism
prop00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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