KEGG   PATHWAY: psom00030
Entry
psom00030                   Pathway                                
Name
Pentose phosphate pathway - Papaver somniferum (opium poppy)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
psom00030  Pentose phosphate pathway
psom00030

Module
psom_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:psom00030]
psom_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:psom00030]
psom_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:psom00030]
psom_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:psom00030]
Other DBs
GO: 0006098
Organism
Papaver somniferum (opium poppy) [GN:psom]
Gene
113294277  glucose-6-phosphate isomerase, cytosolic-like [KO:K01810] [EC:5.3.1.9]
113289242  glucose-6-phosphate isomerase, cytosolic-like isoform X1 [KO:K01810] [EC:5.3.1.9]
113283590  glucose-6-phosphate isomerase 1, chloroplastic-like [KO:K01810] [EC:5.3.1.9]
113356781  glucose-6-phosphate isomerase 1, chloroplastic-like [KO:K01810] [EC:5.3.1.9]
113278784  glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
113304626  glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
113281557  glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
113302640  glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
113276556  glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
113281005  glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
113271695  glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
113358055  glucose-6-phosphate 1-dehydrogenase, chloroplastic-like [KO:K00036] [EC:1.1.1.49 1.1.1.363]
113271757  probable 6-phosphogluconolactonase 1 [KO:K01057] [EC:3.1.1.31]
113280906  probable 6-phosphogluconolactonase 2 [KO:K01057] [EC:3.1.1.31]
113280919  probable 6-phosphogluconolactonase 2 [KO:K01057] [EC:3.1.1.31]
113348275  probable 6-phosphogluconolactonase 4, chloroplastic [KO:K01057] [EC:3.1.1.31]
113349083  probable 6-phosphogluconolactonase 4, chloroplastic [KO:K01057] [EC:3.1.1.31]
113281904  6-phosphogluconate dehydrogenase, decarboxylating 3-like [KO:K00033] [EC:1.1.1.44 1.1.1.343]
113294600  6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic [KO:K00033] [EC:1.1.1.44 1.1.1.343]
113275707  6-phosphogluconate dehydrogenase, decarboxylating 3 [KO:K00033] [EC:1.1.1.44 1.1.1.343]
113328170  6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic [KO:K00033] [EC:1.1.1.44 1.1.1.343]
113300388  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
113281495  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
113318794  ribulose-phosphate 3-epimerase, chloroplastic-like [KO:K01783] [EC:5.1.3.1]
113276590  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
113359657  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
113311944  transketolase 10-like [KO:K00615] [EC:2.2.1.1]
113304940  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
113275213  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
113284313  uncharacterized protein LOC113284313 [KO:K00616] [EC:2.2.1.2]
113271400  uncharacterized protein LOC113271400 [KO:K00616] [EC:2.2.1.2]
113281331  uncharacterized protein LOC113281331 [KO:K00616] [EC:2.2.1.2]
113355491  uncharacterized protein LOC113355491 [KO:K00616] [EC:2.2.1.2]
113299021  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
113318036  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
113326586  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
113339826  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
113296478  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
113331456  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
113318968  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
113351206  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
113358424  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
113350557  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
113353465  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
113354115  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
113281246  uncharacterized protein LOC113281246 [KO:K00852] [EC:2.7.1.15]
113289930  uncharacterized protein LOC113289930 [KO:K00852] [EC:2.7.1.15]
113275010  phosphoglucomutase, chloroplastic-like [KO:K01835] [EC:5.4.2.2]
113304587  phosphoglucomutase, chloroplastic-like [KO:K01835] [EC:5.4.2.2]
113282039  phosphoglucomutase, cytoplasmic-like [KO:K01835] [EC:5.4.2.2]
113275578  phosphoglucomutase, cytoplasmic [KO:K01835] [EC:5.4.2.2]
113319101  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
113313416  ribose-phosphate pyrophosphokinase 1-like isoform X1 [KO:K00948] [EC:2.7.6.1]
113322171  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
113321441  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
113329996  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
113284270  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00131] [EC:1.2.1.9]
113355455  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
113322598  gluconokinase-like [KO:K00851] [EC:2.7.1.12]
113275654  gluconokinase-like [KO:K00851] [EC:2.7.1.12]
113345929  gluconokinase-like [KO:K00851] [EC:2.7.1.12]
113321482  fructose-bisphosphate aldolase 3, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
113321923  fructose-bisphosphate aldolase 1, cytoplasmic [KO:K01623] [EC:4.1.2.13]
113322499  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
113337564  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
113309123  fructose-bisphosphate aldolase 3, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
113348940  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
113348425  fructose-bisphosphate aldolase, cytoplasmic isozyme 1-like [KO:K01623] [EC:4.1.2.13]
113349801  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
113357679  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
113328404  fructose-1,6-bisphosphatase 1, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
113296146  fructose-1,6-bisphosphatase 1, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
113335444  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
113337238  fructose-1,6-bisphosphatase 1, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
113314464  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
113311230  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
113344678  fructose-1,6-bisphosphatase 1, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
113344717  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
113349712  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
113357594  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
113347255  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
113360846  fructose-1,6-bisphosphatase 1, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
113317098  ATP-dependent 6-phosphofructokinase 3-like [KO:K00850] [EC:2.7.1.11]
113296054  ATP-dependent 6-phosphofructokinase 3-like [KO:K00850] [EC:2.7.1.11]
113319627  ATP-dependent 6-phosphofructokinase 5, chloroplastic-like [KO:K00850] [EC:2.7.1.11]
113275949  ATP-dependent 6-phosphofructokinase 5, chloroplastic-like [KO:K00850] [EC:2.7.1.11]
113277430  ATP-dependent 6-phosphofructokinase 5, chloroplastic isoform X1 [KO:K00850] [EC:2.7.1.11]
113281634  ATP-dependent 6-phosphofructokinase 5, chloroplastic-like [KO:K00850] [EC:2.7.1.11]
113298009  ATP-dependent 6-phosphofructokinase 5, chloroplastic-like isoform X1 [KO:K00850] [EC:2.7.1.11]
113348075  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
113349294  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
113283572  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [KO:K00895] [EC:2.7.1.90]
113303619  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [KO:K00895] [EC:2.7.1.90]
113288005  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [KO:K00895] [EC:2.7.1.90]
113356759  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [KO:K00895] [EC:2.7.1.90]
113353220  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [KO:K00895] [EC:2.7.1.90]
113354442  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [KO:K00895] [EC:2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
psom00010  Glycolysis / Gluconeogenesis
psom00040  Pentose and glucuronate interconversions
psom00052  Galactose metabolism
psom00230  Purine metabolism
psom00240  Pyrimidine metabolism
psom00340  Histidine metabolism
psom00630  Glyoxylate and dicarboxylate metabolism
psom00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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