KEGG   PATHWAY: psom00040
Entry
psom00040                   Pathway                                
Name
Pentose and glucuronate interconversions - Papaver somniferum (opium poppy)
Class
Metabolism; Carbohydrate metabolism
Pathway map
psom00040  Pentose and glucuronate interconversions
psom00040

Module
psom_M00081  Pectin degradation [PATH:psom00040]
Organism
Papaver somniferum (opium poppy) [GN:psom]
Gene
113344357  pectinesterase/pectinesterase inhibitor-like [KO:K01051] [EC:3.1.1.11]
113318319  probable pectinesterase/pectinesterase inhibitor 21 [KO:K01051] [EC:3.1.1.11]
113335673  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
113336205  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113347030  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113347031  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113317172  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
113326574  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113319681  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113333092  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113333124  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113337169  pectinesterase/pectinesterase inhibitor PPE8B-like isoform X1 [KO:K01051] [EC:3.1.1.11]
113337448  pectinesterase 31-like [KO:K01051] [EC:3.1.1.11]
113326729  pectinesterase/pectinesterase inhibitor PPE8B-like [KO:K01051] [EC:3.1.1.11]
113290981  pectinesterase QRT1-like [KO:K01051] [EC:3.1.1.11]
113339931  pectinesterase/pectinesterase inhibitor PPE8B-like [KO:K01051] [EC:3.1.1.11]
113291221  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
113345220  probable pectinesterase/pectinesterase inhibitor 40 [KO:K01051] [EC:3.1.1.11]
113293739  pectinesterase 31-like [KO:K01051] [EC:3.1.1.11]
113326312  probable pectinesterase/pectinesterase inhibitor 25 [KO:K01051] [EC:3.1.1.11]
113312576  pectinesterase/pectinesterase inhibitor 18-like [KO:K01051] [EC:3.1.1.11]
113333153  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
113334253  probable pectinesterase/pectinesterase inhibitor 39 [KO:K01051] [EC:3.1.1.11]
113334492  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
113335792  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
113336068  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113341708  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
113341759  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
113341760  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
113346961  probable pectinesterase 53 isoform X1 [KO:K01051] [EC:3.1.1.11]
113302284  pectinesterase QRT1-like [KO:K01051] [EC:3.1.1.11]
113299901  pectinesterase 31-like [KO:K01051] [EC:3.1.1.11]
113328209  pectinesterase/pectinesterase inhibitor PPE8B-like [KO:K01051] [EC:3.1.1.11]
113340323  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113340358  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113308725  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
113335654  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
113329871  pectinesterase QRT1-like [KO:K01051] [EC:3.1.1.11]
113346687  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113345467  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113345493  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113345509  probable pectinesterase/pectinesterase inhibitor 21 [KO:K01051] [EC:3.1.1.11]
113345544  pectinesterase-like isoform X1 [KO:K01051] [EC:3.1.1.11]
113345583  pectinesterase-like isoform X1 [KO:K01051] [EC:3.1.1.11]
113280416  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113353579  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
113359374  probable pectinesterase/pectinesterase inhibitor 36 [KO:K01051] [EC:3.1.1.11]
113354011  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
113354257  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
113360750  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113361409  pectinesterase QRT1-like [KO:K01051] [EC:3.1.1.11]
113348884  probable pectinesterase/pectinesterase inhibitor 21 [KO:K01051] [EC:3.1.1.11]
113360620  pectinesterase 2-like [KO:K01051] [EC:3.1.1.11]
113355233  putative pectinesterase/pectinesterase inhibitor 28 [KO:K01051] [EC:3.1.1.11]
113355234  pectinesterase/pectinesterase inhibitor-like isoform X1 [KO:K01051] [EC:3.1.1.11]
113355235  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
113355236  putative pectinesterase/pectinesterase inhibitor 22 [KO:K01051] [EC:3.1.1.11]
113313280  probable pectate lyase 18 [KO:K01728] [EC:4.2.2.2]
113303486  pectate lyase 1-like [KO:K01728] [EC:4.2.2.2]
113320959  probable pectate lyase 8 [KO:K01728] [EC:4.2.2.2]
113310406  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
113336757  probable pectate lyase P18 [KO:K01728] [EC:4.2.2.2]
113322594  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
113323849  probable pectate lyase 8 isoform X1 [KO:K01728] [EC:4.2.2.2]
113274749  probable pectate lyase 8 isoform X1 [KO:K01728] [EC:4.2.2.2]
113338960  probable pectate lyase 5 isoform X1 [KO:K01728] [EC:4.2.2.2]
113290931  putative pectate lyase 2 [KO:K01728] [EC:4.2.2.2]
113304297  probable pectate lyase 8 isoform X1 [KO:K01728] [EC:4.2.2.2]
113303275  putative pectate lyase 2 [KO:K01728] [EC:4.2.2.2]
113299444  probable pectate lyase 18 [KO:K01728] [EC:4.2.2.2]
113276013  probable pectate lyase P59 [KO:K01728] [EC:4.2.2.2]
113286610  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
113302744  probable pectate lyase 18 [KO:K01728] [EC:4.2.2.2]
113309784  probable pectate lyase 12 [KO:K01728] [EC:4.2.2.2]
113298687  probable pectate lyase 12 [KO:K01728] [EC:4.2.2.2]
113325377  probable pectate lyase 8 [KO:K01728] [EC:4.2.2.2]
113313129  probable pectate lyase 8 [KO:K01728] [EC:4.2.2.2]
113330938  pectate lyase-like [KO:K01728] [EC:4.2.2.2]
113281590  probable pectate lyase P59 [KO:K01728] [EC:4.2.2.2]
113357340  probable pectate lyase P18 [KO:K01728] [EC:4.2.2.2]
113300306  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113296122  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113319267  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113328273  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113330145  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113315439  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113279049  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113330237  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113318689  polygalacturonase-like isoform X1 [KO:K01184] [EC:3.2.1.15]
113320735  probable polygalacturonase At3g15720 isoform X1 [KO:K01184] [EC:3.2.1.15]
113320749  polygalacturonase ADPG2-like isoform X1 [KO:K01184] [EC:3.2.1.15]
113272047  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113329433  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113329459  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113331153  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113339743  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113278304  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113321044  polygalacturonase QRT2-like [KO:K01184] [EC:3.2.1.15]
113321210  polygalacturonase QRT2-like [KO:K01184] [EC:3.2.1.15]
113296119  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113311145  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113314368  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113336059  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113321903  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113329556  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113329819  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113329820  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113329825  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113329826  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113329827  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113326154  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113327911  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113338222  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113274563  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113272745  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113277315  polygalacturonase-like isoform X1 [KO:K01184] [EC:3.2.1.15]
113283894  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113283895  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113309829  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113300274  probable polygalacturonase At1g80170 [KO:K01184] [EC:3.2.1.15]
113321086  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113308708  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113339435  polygalacturonase QRT2-like [KO:K01184] [EC:3.2.1.15]
113330230  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113329961  polygalacturonase-like isoform X1 [KO:K01184] [EC:3.2.1.15]
113338233  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113338241  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113338251  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113338260  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113338451  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113344928  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113285580  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113271955  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113353879  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113359226  polygalacturonase QRT2-like [KO:K01184] [EC:3.2.1.15]
113348721  polygalacturonase-like [KO:K01184] [EC:3.2.1.15]
113347968  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113351590  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
113282480  polygalacturonase At1g48100-like isoform X1 [KO:K01213] [EC:3.2.1.67]
113352561  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
113288094  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
113287031  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
113322095  exopolygalacturonase clone GBGE184-like [KO:K01213] [EC:3.2.1.67]
113282718  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
113289652  uncharacterized transmembrane protein DDB_G0289901-like [KO:K01213] [EC:3.2.1.67]
113307839  exopolygalacturonase clone GBGE184-like [KO:K01213] [EC:3.2.1.67]
113323893  glucuronokinase 1-like [KO:K16190] [EC:2.7.1.43]
113345802  glucuronokinase 1-like [KO:K16190] [EC:2.7.1.43]
113326815  UDP-sugar pyrophosphorylase-like [KO:K12447] [EC:2.7.7.64]
113332494  UDP-sugar pyrophosphorylase-like [KO:K12447] [EC:2.7.7.64]
113291734  UDP-sugar pyrophosphorylase-like [KO:K12447] [EC:2.7.7.64]
113358220  UDP-sugar pyrophosphorylase-like [KO:K12447] [EC:2.7.7.64]
113280215  UDP-glucose 6-dehydrogenase 5-like [KO:K00012] [EC:1.1.1.22]
113290028  UDP-glucose 6-dehydrogenase 5-like [KO:K00012] [EC:1.1.1.22]
113300198  UDP-glucose 6-dehydrogenase 4-like [KO:K00012] [EC:1.1.1.22]
113281781  UDP-glucose 6-dehydrogenase 4 [KO:K00012] [EC:1.1.1.22]
113343078  UDP-glucose 6-dehydrogenase 4-like [KO:K00012] [EC:1.1.1.22]
113275836  UDP-glucose 6-dehydrogenase 4 [KO:K00012] [EC:1.1.1.22]
113303175  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
113298328  UTP--glucose-1-phosphate uridylyltransferase-like [KO:K00963] [EC:2.7.7.9]
113298276  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
113303246  aldo-keto reductase family 4 member C10-like isoform X1 [KO:K00002] [EC:1.1.1.2]
113310344  NADPH-dependent aldo-keto reductase, chloroplastic-like isoform X1 [KO:K00002] [EC:1.1.1.2]
113320822  NADPH-dependent aldo-keto reductase, chloroplastic-like [KO:K00002] [EC:1.1.1.2]
113310979  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
113323519  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
113300388  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
113281495  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
113318794  ribulose-phosphate 3-epimerase, chloroplastic-like [KO:K01783] [EC:5.1.3.1]
113276590  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
113359657  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
113332105  xylulose kinase 2-like [KO:K00854] [EC:2.7.1.17]
113347372  xylulose kinase 2-like isoform X1 [KO:K00854] [EC:2.7.1.17]
113301449  xylose isomerase-like [KO:K01805] [EC:5.3.1.5]
113297734  xylose isomerase-like [KO:K01805] [EC:5.3.1.5]
113297113  sorbitol dehydrogenase-like [KO:K00008] [EC:1.1.1.14]
113302348  sorbitol dehydrogenase-like isoform X1 [KO:K00008] [EC:1.1.1.14]
113301467  FGGY carbohydrate kinase domain-containing protein-like [KO:K00875] [EC:2.7.1.47]
113297726  FGGY carbohydrate kinase domain-containing protein-like [KO:K00875] [EC:2.7.1.47]
113349792  D-ribulose kinase-like isoform X1 [KO:K22935] [EC:2.7.1.47]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
psom00010  Glycolysis / Gluconeogenesis
psom00020  Citrate cycle (TCA cycle)
psom00030  Pentose phosphate pathway
psom00052  Galactose metabolism
psom00053  Ascorbate and aldarate metabolism
psom00500  Starch and sucrose metabolism
psom00520  Amino sugar and nucleotide sugar metabolism
psom00561  Glycerolipid metabolism
psom00562  Inositol phosphate metabolism
psom00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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