KEGG   PATHWAY: pst00010
Entry
pst00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas syringae pv. tomato DC3000
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pst00010  Glycolysis / Gluconeogenesis
pst00010

Module
pst_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pst00010]
pst_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pst00010]
pst_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pst00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas syringae pv. tomato DC3000 [GN:pst]
Gene
PSPTO_0083  algC; phosphomannomutase AlgC [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PSPTO_0239  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
PSPTO_0387  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PSPTO_0390  fba; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
PSPTO_0728  [KO:K00138] [EC:1.2.1.-]
PSPTO_0959  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PSPTO_1047  [KO:K01785] [EC:5.1.3.3]
PSPTO_1287  gap-1; glyceraldehyde 3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
PSPTO_1289  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
PSPTO_1554  eno-1; enolase [KO:K01689] [EC:4.2.1.11]
PSPTO_1558  adhC; alcohol dehydrogenase, class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PSPTO_1825  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PSPTO_1881  [KO:K00128] [EC:1.2.1.3]
PSPTO_2102  gap-2; glyceraldehyde 3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
PSPTO_2182  [KO:K13979] [EC:1.1.1.2]
PSPTO_2201  lpdA; 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PSPTO_2292  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
PSPTO_2636  galM; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
PSPTO_2697  [KO:K13979] [EC:1.1.1.2]
PSPTO_3035  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
PSPTO_3644  [KO:K00128] [EC:1.2.1.3]
PSPTO_3860  aceE-1; pyruvate dehydrogenase, E1 component [KO:K00163] [EC:1.2.4.1]
PSPTO_4285  adhB; alcohol dehydrogenase II [KO:K13954] [EC:1.1.1.1]
PSPTO_4337  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PSPTO_4494  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
PSPTO_4616  eno-2; enolase [KO:K01689] [EC:4.2.1.11]
PSPTO_5005  aceE-2; pyruvate dehydrogenase, E1 component [KO:K00163] [EC:1.2.4.1]
PSPTO_5006  aceF; pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
PSPTO_5168  fbp; fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
PSPTO_5327  gpmA; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
PSPTO_5490  [KO:K01792] [EC:5.1.3.15]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pst00020  Citrate cycle (TCA cycle)
pst00030  Pentose phosphate pathway
pst00500  Starch and sucrose metabolism
pst00620  Pyruvate metabolism
pst00640  Propanoate metabolism
pst00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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