KEGG   PATHWAY: pxn00630
Entry
pxn00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas xantholysinigenes
Class
Metabolism; Carbohydrate metabolism
Pathway map
pxn00630  Glyoxylate and dicarboxylate metabolism
pxn00630

Module
pxn_M00621  Glycine cleavage system [PATH:pxn00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas xantholysinigenes [GN:pxn]
Gene
HU772_009305  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
HU772_015990  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HU772_017520  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HU772_003565  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HU772_001910  malate synthase G [KO:K01638] [EC:2.3.3.9]
HU772_016395  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
HU772_008965  prpC; 2-methylcitrate synthase [KO:K01659] [EC:2.3.3.5]
HU772_008150  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
HU772_008985  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
HU772_013845  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
HU772_014530  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
HU772_015980  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HU772_021725  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HU772_003985  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HU772_017885  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
HU772_009700  VOC family protein [KO:K05606] [EC:5.1.99.1]
HU772_021535  methylaspartate mutase [KO:K19268] [EC:5.4.99.1]
HU772_021530  hypothetical protein [KO:K01846] [EC:5.4.99.1]
HU772_013965  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
HU772_013970  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
HU772_013975  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
HU772_011290  catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
HU772_012430  katB; catalase KatB [KO:K03781] [EC:1.11.1.6]
HU772_000390  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
HU772_002605  catalase [KO:K03781] [EC:1.11.1.6]
HU772_004245  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
HU772_020855  2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
HU772_007495  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
HU772_000250  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
HU772_002235  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HU772_009910  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
HU772_013320  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
HU772_017360  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
HU772_017860  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
HU772_023080  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
HU772_023805  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
HU772_023810  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
HU772_024410  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
HU772_021320  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HU772_001730  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HU772_019880  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
HU772_023850  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
HU772_019890  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HU772_023860  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HU772_016360  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HU772_017385  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HU772_024755  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HU772_019875  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HU772_023855  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HU772_016835  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
HU772_016840  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
HU772_016845  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
HU772_013225  glycerate kinase [KO:K00865] [EC:2.7.1.165]
HU772_016850  glycerate kinase [KO:K11529] [EC:2.7.1.165]
HU772_019730  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HU772_008540  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
HU772_008535  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
HU772_002630  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
HU772_008530  formate dehydrogenase [KO:K00124]
HU772_002635  fdxH; formate dehydrogenase subunit beta [KO:K00124]
HU772_008525  formate dehydrogenase subunit gamma [KO:K00127]
HU772_002640  formate dehydrogenase subunit gamma [KO:K00127]
HU772_001755  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HU772_005025  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HU772_023000  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pxn00010  Glycolysis / Gluconeogenesis
pxn00020  Citrate cycle (TCA cycle)
pxn00030  Pentose phosphate pathway
pxn00053  Ascorbate and aldarate metabolism
pxn00071  Fatty acid degradation
pxn00230  Purine metabolism
pxn00250  Alanine, aspartate and glutamate metabolism
pxn00260  Glycine, serine and threonine metabolism
pxn00620  Pyruvate metabolism
pxn00710  Carbon fixation by Calvin cycle
pxn00750  Vitamin B6 metabolism
pxn00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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