KEGG   PATHWAY: reb00630
Entry
reb00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhodococcus erythropolis BG43
Class
Metabolism; Carbohydrate metabolism
Pathway map
reb00630  Glyoxylate and dicarboxylate metabolism
reb00630

Module
reb_M00012  Glyoxylate cycle [PATH:reb00630]
reb_M00621  Glycine cleavage system [PATH:reb00630]
reb_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:reb00630]
Other DBs
GO: 0046487 0043648
Organism
Rhodococcus erythropolis BG43 [GN:reb]
Gene
XU06_07725  Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
XU06_02590  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
XU06_11915  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
XU06_27680  acyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
XU06_15030  malate synthase [KO:K01638] [EC:2.3.3.9]
XU06_13620  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
XU06_29570  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
XU06_24290  citrate synthase [KO:K01647] [EC:2.3.3.1]
XU06_21875  hypothetical protein [KO:K01647] [EC:2.3.3.1]
XU06_21895  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
XU06_14275  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
XU06_20135  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_24605  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_01050  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_05760  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_25480  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_24945  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_25060  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_04200  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_04365  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_04390  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_26395  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_21305  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_21310  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_18240  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_20555  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_02065  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_02165  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_05325  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
XU06_18245  glyoxalase [KO:K05606] [EC:5.1.99.1]
XU06_08655  acetyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
XU06_05930  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
XU06_10350  acetyl-COA carboxylase [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
XU06_17110  propionyl-CoA carboxylase subunit beta [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
XU06_14375  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
XU06_14380  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
XU06_24745  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
XU06_05970  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
XU06_19290  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
XU06_13055  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
XU06_00130  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
XU06_27730  catalase [KO:K03781] [EC:1.11.1.6]
XU06_02335  catalase [KO:K03781] [EC:1.11.1.6]
XU06_17035  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
XU06_16840  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
XU06_16970  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
XU06_17980  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
XU06_29090  glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
XU06_24645  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
XU06_20050  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
XU06_18350  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
XU06_15045  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
XU06_16795  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
XU06_29385  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
XU06_07550  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
XU06_29005  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
XU06_21785  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
XU06_15070  glycine cleavage system protein H [KO:K02437]
XU06_09995  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
XU06_16755  hypothetical protein [KO:K00865] [EC:2.7.1.165]
XU06_19400  kgd; alpha-ketoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
XU06_16945  cupin [KO:K01569] [EC:4.1.1.2]
XU06_26310  kynurenine formamidase [KO:K07130] [EC:3.5.1.9]
XU06_07840  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
XU06_07710  formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
reb00010  Glycolysis / Gluconeogenesis
reb00020  Citrate cycle (TCA cycle)
reb00030  Pentose phosphate pathway
reb00053  Ascorbate and aldarate metabolism
reb00071  Fatty acid degradation
reb00230  Purine metabolism
reb00250  Alanine, aspartate and glutamate metabolism
reb00260  Glycine, serine and threonine metabolism
reb00620  Pyruvate metabolism
reb00750  Vitamin B6 metabolism
reb00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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