KEGG   PATHWAY: rfa00010
Entry
rfa00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Rhodococcoides fascians D188
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rfa00010  Glycolysis / Gluconeogenesis
rfa00010

Module
rfa_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rfa00010]
rfa_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rfa00010]
rfa_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rfa00010]
rfa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rfa00010]
Other DBs
GO: 0006096 0006094
Organism
Rhodococcoides fascians D188 [GN:rfa]
Gene
A3L23_00286  thcA; EPTC-inducible aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
A3L23_00418  galM_1; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
A3L23_00498  eno; Enolase [KO:K01689] [EC:4.2.1.11]
A3L23_00618  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
A3L23_00699  galM_2; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
A3L23_00913  fba_1; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A3L23_01007  ald_1; 3-succinoylsemialdehyde-pyridine dehydrogenase [KO:K00128] [EC:1.2.1.3]
A3L23_01009  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
A3L23_01014  pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
A3L23_01019  pspA_3; Phosphoserine phosphatase 1 [KO:K15634] [EC:5.4.2.11]
A3L23_01025  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A3L23_01027  pspA_4; Phosphoserine phosphatase 1 [KO:K15634] [EC:5.4.2.11]
A3L23_01149  adhT_1; Alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
A3L23_01325  aceE_1; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
A3L23_01358  [KO:K00129] [EC:1.2.1.5]
A3L23_01402  nanK; N-acetylmannosamine kinase [KO:K25026]
A3L23_01403  pckG; Phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
A3L23_01437  acsA_3; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
A3L23_02243  pdhD; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A3L23_02401  acsA_4; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
A3L23_02579  fba_2; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
A3L23_02724  lpdC; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A3L23_02749  adhC2; NADP-dependent alcohol dehydrogenase C 2 [KO:K13979] [EC:1.1.1.2]
A3L23_02793  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
A3L23_03017  glpX; Fructose-1,6-bisphosphatase class 2 [KO:K02446] [EC:3.1.3.11]
A3L23_03243  crr; Glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
A3L23_03837  aceE_2; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
A3L23_03888  dlaT; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
A3L23_03923  glkA; Glucokinase [KO:K25026]
A3L23_04029  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
A3L23_04349  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
A3L23_04350  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
A3L23_04351  gapA; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
A3L23_04478  ppgK; Polyphosphate glucokinase [KO:K00886] [EC:2.7.1.63]
A3L23_04741  pfkA; ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
A3L23_04800  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
rfa00020  Citrate cycle (TCA cycle)
rfa00030  Pentose phosphate pathway
rfa00500  Starch and sucrose metabolism
rfa00620  Pyruvate metabolism
rfa00640  Propanoate metabolism
rfa00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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