KEGG   PATHWAY: seen00630
Entry
seen00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736
Class
Metabolism; Carbohydrate metabolism
Pathway map
seen00630  Glyoxylate and dicarboxylate metabolism
seen00630

Module
seen_M00012  Glyoxylate cycle [PATH:seen00630]
seen_M00621  Glycine cleavage system [PATH:seen00630]
Other DBs
GO: 0046487 0043648
Organism
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 [GN:seen]
Gene
SE451236_03950  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
SE451236_04410  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SE451236_03945  malate synthase [KO:K01638] [EC:2.3.3.9]
SE451236_22910  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
SE451236_09675  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
SE451236_14495  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
SE451236_06810  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
SE451236_21195  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SE451236_12460  katE; hydroperoxidase II [KO:K03781] [EC:1.11.1.6]
SE451236_11525  ghrA; bifunctional glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
SE451236_02690  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
SE451236_03495  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
SE451236_00870  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SE451236_19000  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SE451236_21375  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
SE451236_21385  gcvT; glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
SE451236_06790  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SE451236_21380  glycine cleavage system protein H [KO:K02437]
SE451236_08615  acetolactate synthase [KO:K01608] [EC:4.1.1.47]
SE451236_08620  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
SE451236_08625  tartronate semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
SE451236_22365  garR; tartronate semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
SE451236_22360  glycerate kinase [KO:K00865] [EC:2.7.1.165]
SE451236_08650  glycerate kinase [KO:K00865] [EC:2.7.1.165]
SE451236_20895  glycerate kinase [KO:K00865] [EC:2.7.1.165]
SE451236_20960  L-1,2-propanediol oxidoreductase [KO:K00048] [EC:1.1.1.77]
SE451236_22890  tartrate dehydratase subunit alpha [KO:K03779] [EC:4.2.1.32]
SE451236_22885  L(+)-tartrate dehydratase subunit beta [KO:K03780] [EC:4.2.1.32]
SE451236_15365  ketohydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SE451236_00715  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
SE451236_00720  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
SE451236_00725  formate dehydrogenase-N subunit beta [KO:K00124]
SE451236_00730  formate dehydrogenase-N subunit gamma [KO:K00127]
SE451236_14720  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
seen00010  Glycolysis / Gluconeogenesis
seen00020  Citrate cycle (TCA cycle)
seen00030  Pentose phosphate pathway
seen00053  Ascorbate and aldarate metabolism
seen00071  Fatty acid degradation
seen00230  Purine metabolism
seen00250  Alanine, aspartate and glutamate metabolism
seen00260  Glycine, serine and threonine metabolism
seen00620  Pyruvate metabolism
seen00750  Vitamin B6 metabolism
seen00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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