KEGG   PATHWAY: sfv00330
Entry
sfv00330                    Pathway                                
Name
Arginine and proline metabolism - Shigella flexneri 8401 (serotype 5b)
Class
Metabolism; Amino acid metabolism
Pathway map
sfv00330  Arginine and proline metabolism
sfv00330

Module
sfv_M00015  Proline biosynthesis, glutamate => proline [PATH:sfv00330]
sfv_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sfv00330]
sfv_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:sfv00330]
Other DBs
GO: 0006525 0006560
Organism
Shigella flexneri 8401 (serotype 5b) [GN:sfv]
Gene
SFV_0111  speD; S-adenosylmethionine decarboxylase [KO:K01611] [EC:4.1.1.50]
SFV_0112  speE; spermidine synthase [KO:K00797] [EC:2.5.1.16]
SFV_0285  proA; gamma-glutamylphosphate reductase [KO:K00147] [EC:1.2.1.41]
SFV_0286  proB; gamma-glutamate kinase [KO:K00931] [EC:2.7.2.11]
SFV_0351  proC; pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
SFV_0930  aspC; aspartate aminotransferase [KO:K00813] [EC:2.6.1.1]
SFV_1311  [KO:K09470] [EC:6.3.1.11]
SFV_1312  ycjL; probable amidotransferase subunit [KO:K09473] [EC:3.5.1.94]
SFV_1314  aldH; aldehyde dehydrogenase, prefers NADP over NAD [KO:K09472] [EC:1.2.1.99]
SFV_1315  ordL; probable oxidoreductase [KO:K09471] [EC:1.4.3.-]
SFV_1473  [KO:K00673] [EC:2.3.1.109]
SFV_1474  [KO:K06447] [EC:1.2.1.71]
SFV_1476  ydjS; conserved hypothetical protein [KO:K05526] [EC:3.5.1.96]
SFV_1770  [KO:K00137] [EC:1.2.1.19]
SFV_2989  speB; agmatinase [KO:K01480] [EC:3.5.3.11]
SFV_2993  speA; biosynthetic arginine decarboxylase [KO:K01585] [EC:4.1.1.19]
SFV_3024  speC; ornithine decarboxylase isozyme [KO:K01581] [EC:4.1.1.17]
SFV_3114  ygjG; probable ornithine aminotransferase [KO:K09251] [EC:2.6.1.82]
SFV_4113  adiA; biodegradative arginine decarboxylase [KO:K01584] [EC:4.1.1.19]
Compound
C00012  Peptide
C00019  S-Adenosyl-L-methionine
C00022  Pyruvate
C00025  L-Glutamate
C00048  Glyoxylate
C00062  L-Arginine
C00077  L-Ornithine
C00086  Urea
C00134  Putrescine
C00148  L-Proline
C00179  Agmatine
C00213  Sarcosine
C00223  p-Coumaroyl-CoA
C00300  Creatine
C00315  Spermidine
C00334  4-Aminobutanoate
C00406  Feruloyl-CoA
C00431  5-Aminopentanoate
C00436  N-Carbamoylputrescine
C00441  L-Aspartate 4-semialdehyde
C00533  Nitric oxide
C00555  4-Aminobutyraldehyde
C00581  Guanidinoacetate
C00750  Spermine
C00763  D-Proline
C00791  Creatinine
C00884  Homocarnosine
C00986  1,3-Diaminopropane
C01035  4-Guanidinobutanoate
C01043  N-Carbamoylsarcosine
C01110  5-Amino-2-oxopentanoic acid
C01137  S-Adenosylmethioninamine
C01157  Hydroxyproline
C01165  L-Glutamate 5-semialdehyde
C01250  N-Acetyl-L-glutamate 5-semialdehyde
C01682  Nopaline
C02305  Phosphocreatine
C02565  N-Methylhydantoin
C02647  4-Guanidinobutanal
C02714  N-Acetylputrescine
C02946  4-Acetamidobutanoate
C03078  4-Guanidinobutanamide
C03166  Phosphoguanidinoacetate
C03287  L-Glutamyl 5-phosphate
C03296  N2-Succinyl-L-arginine
C03375  Norspermidine
C03415  N2-Succinyl-L-ornithine
C03564  1-Pyrroline-2-carboxylate
C03771  5-Guanidino-2-oxopentanoate
C03912  (S)-1-Pyrroline-5-carboxylate
C04137  Octopine
C04281  L-1-Pyrroline-3-hydroxy-5-carboxylate
C05147  trans-3-Hydroxy-L-proline
C05931  N-Succinyl-L-glutamate
C05932  N-Succinyl-L-glutamate 5-semialdehyde
C05933  N(omega)-Hydroxyarginine
C05936  N4-Acetylaminobutanal
C05938  L-4-Hydroxyglutamate semialdehyde
C05945  L-Arginine phosphate
C05946  (4R)-4-Hydroxy-2-oxoglutarate
C05947  L-erythro-4-Hydroxyglutamate
C10497  Feruloylputrescine
C15699  gamma-L-Glutamylputrescine
C15700  gamma-Glutamyl-gamma-aminobutyraldehyde
C15767  4-(L-gamma-Glutamylamino)butanoate
C18172  Carboxyspermidine
C18174  Carboxynorspermidine
C18326  p-Coumaroylputrescine
C19706  cis-3-Hydroxy-L-proline
C20560  N1-(3-Aminopropyl)agmatine
C22886  N1-[(S)-3-amino-3-carboxypropyl]agmatine
Reference
PMID:5288244
  Authors
Haake P, Allen GW.
  Title
Studies on phosphorylation by phosphoroguanidinates. The mechanism of action of creatine: ATP transphosphorylase (creatine kinase).
  Journal
Proc Natl Acad Sci U S A 68:2691-3 (1971)
DOI:10.1073/pnas.68.11.2691
Reference
PMID:16499623
  Authors
Kurihara S, Oda S, Kumagai H, Suzuki H.
  Title
Gamma-glutamyl-gamma-aminobutyrate hydrolase in the putrescine utilization pathway of Escherichia coli K-12.
  Journal
FEMS Microbiol Lett 256:318-23 (2006)
DOI:10.1111/j.1574-6968.2006.00137.x
Reference
PMID:15590624
  Authors
Kurihara S, Oda S, Kato K, Kim HG, Koyanagi T, Kumagai H, Suzuki H.
  Title
A novel putrescine utilization pathway involves gamma-glutamylated intermediates of Escherichia coli K-12.
  Journal
J Biol Chem 280:4602-8 (2005)
DOI:10.1074/jbc.M411114200
Related
pathway
sfv00020  Citrate cycle (TCA cycle)
sfv00220  Arginine biosynthesis
sfv00250  Alanine, aspartate and glutamate metabolism
sfv00260  Glycine, serine and threonine metabolism
sfv00270  Cysteine and methionine metabolism
sfv00310  Lysine degradation
sfv00410  beta-Alanine metabolism
sfv00470  D-Amino acid metabolism
sfv00480  Glutathione metabolism
sfv00630  Glyoxylate and dicarboxylate metabolism
sfv00650  Butanoate metabolism
sfv00770  Pantothenate and CoA biosynthesis
KO pathway
ko00330   

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