PATHWAY: sil00240 Help Entry sil00240                    Pathway                                 Name Pyrimidine metabolism - Ruegeria pomeroyi Class Metabolism; Nucleotide metabolism BRITE hierarchy Pathway map sil00240   Pyrimidine metabolism Ortholog table Module sil_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:sil00240] sil_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sil00240] Other DBs GO:  0006220 0006213 Organism Ruegeria pomeroyi [GN:sil] Gene SPO0923   carB; carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5] SPO1377   carA; carbamoyl-phosphate synthase, small subunit [KO:K01956] [EC:6.3.5.5] SPO0287   pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2] SPO2653   dihydroorotase, homodimeric type [KO:K01465] [EC:3.5.2.3] SPO0284   dihydroorotase, multifunctional complex type [KO:K01465] [EC:3.5.2.3] SPO2907   pyrD; dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2] SPO2654   pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10] SPO3278   pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23] SPO1662   pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22] SPO2444   ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6] SPO2469   mazG family protein [KO:K04765] [EC:3.6.1.9] SPOA0078   maf-2; maf protein [KO:K06287] [EC:3.6.1.-] SPO3892   maf-1; Maf [KO:K06287] [EC:3.6.1.-] SPO1312   pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2] SPOA0017   cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25] SPO2904   Ser/Thr protein phosphatase/nucleotidase, putative [KO:K11751] [EC:3.1.3.5 3.6.1.45] SPO2688   surE; acid phosphatase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6] SPO2926   upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9] SPO3542   2`,3`-cyclic-nucleotide 2`-phosphodiesterase, putative [KO:K01119] [EC:3.1.4.16 3.1.3.6] SPO2953   Ser/Thr protein phosphatase family protein [KO:K09769] [EC:3.1.4.16] SPO2061   indigoidine synthase A family protein [KO:K16329] [EC:4.2.1.70] SPO2930   cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5] SPO2806   cytosine deaminase, putative [KO:K01485] [EC:3.5.4.1 3.5.4.21] SPO2498   2''-deoxycytidine 5''-triphosphate deaminase-like protein [KO:K01494] [EC:3.5.4.13] SPO2136   nrdJ; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1] SPO3194   ribonucleoside-diphosphate reductase, putative [KO:K00525] [EC:1.17.4.1] SPO3863   HD domain protein [KO:K06952] [EC:3.1.3.89] SPO2740   tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9] SPO0409   dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23] SPO2929   deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4] SPO0914   tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21] SPO1273   thyX; thymidylate synthase, flavin-dependent [KO:K03465] [EC:2.1.1.148] SPO1776   pyridine nucleotide-disulfide oxidoreductase family protein [KO:K17722] [EC:1.3.1.1] SPO1777   dihydroorotate dehydrogenase family protein [KO:K17723] [EC:1.3.1.1] SPO1783   hydA; D-hydantoinase [KO:K01464] [EC:3.5.2.2] SPO1781   amidase, hydantoinase/carbamoylase family [KO:K06016] [EC:3.5.1.6 3.5.1.87] SPO3304   amidase, hydantoinase/carbamoylase family [KO:K06016] [EC:3.5.1.6 3.5.1.87] SPO1828   isochorismatase family protein [KO:K09020] [EC:3.5.1.110] SPO1471   isochorismatase family protein [KO:K09020] [EC:3.5.1.110] Compound C00015   UDP C00039   DNA C00046   RNA C00055   CMP C00063   CTP C00064   L-Glutamine C00075   UTP C00086   Urea C00099   beta-Alanine C00105   UMP C00106   Uracil C00112   CDP C00119   5-Phospho-alpha-D-ribose 1-diphosphate C00169   Carbamoyl phosphate C00178   Thymine C00214   Thymidine C00222   3-Oxopropanoate C00239   dCMP C00295   Orotate C00299   Uridine C00337   (S)-Dihydroorotate C00363   dTDP C00364   dTMP C00365   dUMP C00380   Cytosine C00383   Malonate C00429   5,6-Dihydrouracil C00438   N-Carbamoyl-L-aspartate C00458   dCTP C00459   dTTP C00460   dUTP C00475   Cytidine C00526   Deoxyuridine C00672   2-Deoxy-D-ribose 1-phosphate C00705   dCDP C00813   Barbiturate C00881   Deoxycytidine C00941   3',5'-Cyclic CMP C01013   3-Hydroxypropanoate C01103   Orotidine 5'-phosphate C01168   Pseudouridine 5'-phosphate C01205   (R)-3-Amino-2-methylpropanoate C01346   dUDP C01368   3'-UMP C01563   Carbamate C02067   Pseudouridine C02170   Methylmalonate C02354   2',3'-Cyclic CMP C02355   2',3'-Cyclic UMP C02376   5-Methylcytosine C02642   3-Ureidopropionate C03997   5-Hydroxymethyldeoxycytidylate C05281   5-Methylbarbiturate C05822   3'-CMP C06198   P1,P4-Bis(5'-uridyl) tetraphosphate C11038   2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate C11039   2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate C15607   3-Oxo-3-ureidopropanoate C20231   (Z)-3-Ureidoacrylate peracid C20249   (Z)-3-Peroxyaminoacrylate C20253   Aminoacrylate C20254   Ureidoacrylate C20846   3-Oxo-3-ureidoisobutyrate C21028   (R)-5,6-Dihydrothymine C21029   (R)-3-Ureidoisobutyrate C22509   3',5'-Cyclic UMP Related pathway sil00030   Pentose phosphate pathway sil00220   Arginine biosynthesis sil00250   Alanine, aspartate and glutamate metabolism sil00280   Valine, leucine and isoleucine degradation sil00410   beta-Alanine metabolism KO pathway ko00240     LinkDB All DBs

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