KEGG   PATHWAY: ssem00010
Entry
ssem00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Shewanella sedimentimangrovi
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ssem00010  Glycolysis / Gluconeogenesis
ssem00010

Module
ssem_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ssem00010]
ssem_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ssem00010]
ssem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ssem00010]
Other DBs
GO: 0006096 0006094
Organism
Shewanella sedimentimangrovi [GN:ssem]
Gene
JYB85_04340  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
JYB85_02660  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
JYB85_13970  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
JYB85_04570  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
JYB85_08795  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
JYB85_08805  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
JYB85_13975  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
JYB85_00245  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
JYB85_13035  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
JYB85_08765  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
JYB85_10270  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
JYB85_16855  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
JYB85_16850  aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
JYB85_16845  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
JYB85_15830  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
JYB85_15825  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
JYB85_09425  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
JYB85_05105  yiaY; L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
JYB85_17850  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
JYB85_10305  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
JYB85_16215  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
JYB85_09320  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
JYB85_10580  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
JYB85_00790  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
JYB85_09660  crr; PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ssem00020  Citrate cycle (TCA cycle)
ssem00030  Pentose phosphate pathway
ssem00500  Starch and sucrose metabolism
ssem00620  Pyruvate metabolism
ssem00640  Propanoate metabolism
ssem00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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