KEGG   PATHWAY: svm00010
Entry
svm00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Shewanella vesiculosa
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
svm00010  Glycolysis / Gluconeogenesis
svm00010

Module
svm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:svm00010]
svm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:svm00010]
svm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:svm00010]
Other DBs
GO: 0006096 0006094
Organism
Shewanella vesiculosa [GN:svm]
Gene
KDH10_002494  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
KDH10_003864  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
KDH10_001986  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
KDH10_000909  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
KDH10_000911  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
KDH10_003863  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
KDH10_003114  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
KDH10_001924  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
KDH10_000859  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
KDH10_000659  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
KDH10_003379  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
KDH10_003380  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
KDH10_003381  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KDH10_003058  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
KDH10_000867  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
KDH10_000131  yiaY; L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
KDH10_000504  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KDH10_003478  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
KDH10_000883  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
KDH10_000650  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
KDH10_002950  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
KDH10_000746  crr; PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
KDH10_000297  ptsG; PTS glucose transporter subunit IIBC [KO:K02779] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
svm00020  Citrate cycle (TCA cycle)
svm00030  Pentose phosphate pathway
svm00500  Starch and sucrose metabolism
svm00620  Pyruvate metabolism
svm00640  Propanoate metabolism
svm00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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