KEGG   PATHWAY: tcc00030
Entry
tcc00030                    Pathway                                
Name
Pentose phosphate pathway - Theobroma cacao (cacao)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
tcc00030  Pentose phosphate pathway
tcc00030

Module
tcc_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:tcc00030]
tcc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:tcc00030]
tcc_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:tcc00030]
tcc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:tcc00030]
Other DBs
GO: 0006098
Organism
Theobroma cacao (cacao) [GN:tcc]
Gene
18591368  glucose-6-phosphate isomerase, cytosolic [KO:K01810] [EC:5.3.1.9]
18591788  glucose-6-phosphate isomerase 1, chloroplastic [KO:K01810] [EC:5.3.1.9]
18612476  glucose-6-phosphate 1-dehydrogenase 1, chloroplastic [KO:K00036] [EC:1.1.1.49 1.1.1.363]
18608929  glucose-6-phosphate 1-dehydrogenase, chloroplastic [KO:K00036] [EC:1.1.1.49 1.1.1.363]
18600930  glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform [KO:K00036] [EC:1.1.1.49 1.1.1.363]
18600614  glucose-6-phosphate 1-dehydrogenase 4, chloroplastic [KO:K00036] [EC:1.1.1.49 1.1.1.363]
18610229  probable 6-phosphogluconolactonase 1 [KO:K01057] [EC:3.1.1.31]
18605834  probable 6-phosphogluconolactonase 4, chloroplastic [KO:K01057] [EC:3.1.1.31]
18592261  probable 6-phosphogluconolactonase 2 [KO:K01057] [EC:3.1.1.31]
18606635  6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic [KO:K00033] [EC:1.1.1.44 1.1.1.343]
18610129  6-phosphogluconate dehydrogenase, decarboxylating 3 [KO:K00033] [EC:1.1.1.44 1.1.1.343]
18601816  6-phosphogluconate dehydrogenase, decarboxylating 1 [KO:K00033] [EC:1.1.1.44 1.1.1.343]
18601820  6-phosphogluconate dehydrogenase, decarboxylating 3 [KO:K00033] [EC:1.1.1.44 1.1.1.343]
18600986  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
18604742  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
18614321  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
18608825  transaldolase [KO:K00616] [EC:2.2.1.2]
18606312  transaldolase [KO:K00616] [EC:2.2.1.2]
18609737  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
18600222  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
18595103  probable ribose-5-phosphate isomerase 4, chloroplastic [KO:K01807] [EC:5.3.1.6]
18594545  ribokinase [KO:K00852] [EC:2.7.1.15]
18609836  phosphoglucomutase, cytoplasmic [KO:K01835] [EC:5.4.2.2]
18605458  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
18606090  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
18585706  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
18587864  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
18587717  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
18600678  probable gluconokinase [KO:K00851] [EC:2.7.1.12]
18610808  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
18607690  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
18609074  probable fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
18598162  fructose-bisphosphate aldolase cytoplasmic isozyme [KO:K01623] [EC:4.1.2.13]
18593221  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
18607389  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
18608197  fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
18597627  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
18592577  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
18588012  ATP-dependent 6-phosphofructokinase 6 [KO:K00850] [EC:2.7.1.11]
18611481  ATP-dependent 6-phosphofructokinase 5, chloroplastic [KO:K00850] [EC:2.7.1.11]
18605293  ATP-dependent 6-phosphofructokinase 4, chloroplastic [KO:K00850] [EC:2.7.1.11]
18588475  ATP-dependent 6-phosphofructokinase 3 [KO:K00850] [EC:2.7.1.11]
18597365  ATP-dependent 6-phosphofructokinase 2 [KO:K00850] [EC:2.7.1.11]
18596042  ATP-dependent 6-phosphofructokinase 6 [KO:K00850] [EC:2.7.1.11]
18612342  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [KO:K00895] [EC:2.7.1.90]
18597231  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [KO:K00895] [EC:2.7.1.90]
18592071  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [KO:K00895] [EC:2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
tcc00010  Glycolysis / Gluconeogenesis
tcc00040  Pentose and glucuronate interconversions
tcc00052  Galactose metabolism
tcc00230  Purine metabolism
tcc00240  Pyrimidine metabolism
tcc00340  Histidine metabolism
tcc00630  Glyoxylate and dicarboxylate metabolism
tcc00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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