KEGG   PATHWAY: tcc00040
Entry
tcc00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Theobroma cacao (cacao)
Class
Metabolism; Carbohydrate metabolism
Pathway map
tcc00040  Pentose and glucuronate interconversions
tcc00040

Module
tcc_M00081  Pectin degradation [PATH:tcc00040]
Organism
Theobroma cacao (cacao) [GN:tcc]
Gene
18588198  pectinesterase [KO:K01051] [EC:3.1.1.11]
18588200  pectinesterase/pectinesterase inhibitor PPE8B [KO:K01051] [EC:3.1.1.11]
18600502  putative pectinesterase/pectinesterase inhibitor 28 [KO:K01051] [EC:3.1.1.11]
108661504  pectinesterase-like [KO:K01051] [EC:3.1.1.11]
18613597  probable pectinesterase/pectinesterase inhibitor 7 [KO:K01051] [EC:3.1.1.11]
18613795  pectinesterase [KO:K01051] [EC:3.1.1.11]
18613734  pectinesterase/pectinesterase inhibitor PPE8B [KO:K01051] [EC:3.1.1.11]
18613750  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
18605246  putative pectinesterase 63 [KO:K01051] [EC:3.1.1.11]
18605373  probable pectinesterase/pectinesterase inhibitor 33 [KO:K01051] [EC:3.1.1.11]
108660614  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
18614330  pectinesterase 2 [KO:K01051] [EC:3.1.1.11]
18610811  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
18605372  pectinesterase 2 [KO:K01051] [EC:3.1.1.11]
18601567  pectinesterase 31 [KO:K01051] [EC:3.1.1.11]
18603770  pectinesterase [KO:K01051] [EC:3.1.1.11]
18614329  probable pectinesterase/pectinesterase inhibitor 36 [KO:K01051] [EC:3.1.1.11]
18588205  pectinesterase [KO:K01051] [EC:3.1.1.11]
18600504  pectinesterase [KO:K01051] [EC:3.1.1.11]
18588499  probable pectinesterase 53 [KO:K01051] [EC:3.1.1.11]
108663294  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
18603543  probable pectinesterase/pectinesterase inhibitor 21 [KO:K01051] [EC:3.1.1.11]
18600505  putative pectinesterase/pectinesterase inhibitor 22 [KO:K01051] [EC:3.1.1.11]
18596314  PME; pectinesterase [KO:K01051] [EC:3.1.1.11]
18597102  pectinesterase [KO:K01051] [EC:3.1.1.11]
18593313  pectinesterase QRT1 [KO:K01051] [EC:3.1.1.11]
18586984  probable pectinesterase/pectinesterase inhibitor 25 [KO:K01051] [EC:3.1.1.11]
18591407  putative pectinesterase 11 [KO:K01051] [EC:3.1.1.11]
18605691  pectate lyase 1 [KO:K01728] [EC:4.2.2.2]
18609637  probable pectate lyase 5 [KO:K01728] [EC:4.2.2.2]
18612829  probable pectate lyase 8 [KO:K01728] [EC:4.2.2.2]
18605692  pectate lyase 1 [KO:K01728] [EC:4.2.2.2]
18610480  probable pectate lyase P59 [KO:K01728] [EC:4.2.2.2]
18600894  pectate lyase [KO:K01728] [EC:4.2.2.2]
18604606  probable pectate lyase P59 [KO:K01728] [EC:4.2.2.2]
18605010  probable pectate lyase 18 [KO:K01728] [EC:4.2.2.2]
18602793  probable pectate lyase 1 [KO:K01728] [EC:4.2.2.2]
18601452  pectate lyase [KO:K01728] [EC:4.2.2.2]
18598055  probable pectate lyase 12 [KO:K01728] [EC:4.2.2.2]
18593288  putative pectate lyase 21 [KO:K01728] [EC:4.2.2.2]
18597629  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
18597194  probable pectate lyase 16 [KO:K01728] [EC:4.2.2.2]
18586262  probable pectate lyase 4 [KO:K01728] [EC:4.2.2.2]
18586518  probable pectate lyase 13 [KO:K01728] [EC:4.2.2.2]
18601444  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
18588755  probable polygalacturonase At1g80170 [KO:K01184] [EC:3.2.1.15]
18597408  polygalacturonase [KO:K01184] [EC:3.2.1.15]
18587806  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
18600781  polygalacturonase At1g48100 [KO:K01184] [EC:3.2.1.15]
18602746  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
18597409  polygalacturonase [KO:K01184] [EC:3.2.1.15]
18597410  polygalacturonase [KO:K01184] [EC:3.2.1.15]
18591692  probable polygalacturonase At3g15720 [KO:K01184] [EC:3.2.1.15]
18595239  polygalacturonase ADPG1 [KO:K01184] [EC:3.2.1.15]
18598975  polygalacturonase [KO:K01184] [EC:3.2.1.15]
18614621  polygalacturonase [KO:K01184] [EC:3.2.1.15]
108663973  exopolygalacturonase-like [KO:K01213] [EC:3.2.1.67]
18603552  exopolygalacturonase [KO:K01213] [EC:3.2.1.67]
18612416  exopolygalacturonase [KO:K01213] [EC:3.2.1.67]
18612414  exopolygalacturonase [KO:K01213] [EC:3.2.1.67]
108661649  polygalacturonase-like [KO:K01213] [EC:3.2.1.67]
18593389  exopolygalacturonase [KO:K01213] [EC:3.2.1.67]
18594528  exopolygalacturonase [KO:K01213] [EC:3.2.1.67]
18586418  exopolygalacturonase [KO:K01213] [EC:3.2.1.67]
18603551  exopolygalacturonase clone GBGE184 [KO:K01213] [EC:3.2.1.67]
18613601  exopolygalacturonase clone GBGE184 [KO:K01213] [EC:3.2.1.67]
18586417  exopolygalacturonase [KO:K01213] [EC:3.2.1.67]
18608380  exopolygalacturonase [KO:K01213] [EC:3.2.1.67]
18609518  polygalacturonase At1g48100 [KO:K01213] [EC:3.2.1.67]
18600854  glucuronokinase 1 [KO:K16190] [EC:2.7.1.43]
18592423  UDP-sugar pyrophosphorylase [KO:K12447] [EC:2.7.7.64]
18610282  UDP-glucose 6-dehydrogenase 1 [KO:K00012] [EC:1.1.1.22]
18604792  UDP-glucose 6-dehydrogenase 1 [KO:K00012] [EC:1.1.1.22]
18601622  UDP-glucose 6-dehydrogenase 2 [KO:K00012] [EC:1.1.1.22]
18600669  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
18599737  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
18597692  aldo-keto reductase family 4 member C9 [KO:K00002] [EC:1.1.1.2]
18597445  aldose reductase [KO:K00002] [EC:1.1.1.2]
18610063  aldo-keto reductase family 4 member C10 [KO:K00002] [EC:1.1.1.2]
108662286  aldo-keto reductase family 4 member C9-like [KO:K00002] [EC:1.1.1.2]
18597693  aldo-keto reductase family 4 member C9 [KO:K00002] [EC:1.1.1.2]
18597691  aldo-keto reductase family 4 member C9 [KO:K00002] [EC:1.1.1.2]
108662266  aldo-keto reductase family 4 member C8-like [KO:K00002] [EC:1.1.1.2]
18605342  aldo-keto reductase family 4 member C9 [KO:K00002] [EC:1.1.1.2]
18600986  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
18604742  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
18591893  xylulose kinase [KO:K00854] [EC:2.7.1.17]
18587334  xylose isomerase [KO:K01805] [EC:5.3.1.5]
18605484  sorbitol dehydrogenase [KO:K00008] [EC:1.1.1.14]
18605483  L-idonate 5-dehydrogenase [KO:K00008] [EC:1.1.1.14]
18589218  FGGY carbohydrate kinase domain-containing protein [KO:K00875] [EC:2.7.1.47]
18607708  xylulose kinase [KO:K22935] [EC:2.7.1.47]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
tcc00010  Glycolysis / Gluconeogenesis
tcc00020  Citrate cycle (TCA cycle)
tcc00030  Pentose phosphate pathway
tcc00052  Galactose metabolism
tcc00053  Ascorbate and aldarate metabolism
tcc00500  Starch and sucrose metabolism
tcc00520  Amino sugar and nucleotide sugar metabolism
tcc00561  Glycerolipid metabolism
tcc00562  Inositol phosphate metabolism
tcc00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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