KEGG   PATHWAY: vti00630
Entry
vti00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Vibrio tarriae
Class
Metabolism; Carbohydrate metabolism
Pathway map
vti00630  Glyoxylate and dicarboxylate metabolism
vti00630

Module
vti_M00012  Glyoxylate cycle [PATH:vti00630]
vti_M00621  Glycine cleavage system [PATH:vti00630]
Other DBs
GO: 0046487 0043648
Organism
Vibrio tarriae [GN:vti]
Gene
CEQ48_15185  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
CEQ48_17575  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CEQ48_15190  malate synthase A [KO:K01638] [EC:2.3.3.9]
CEQ48_16705  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
CEQ48_08505  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
CEQ48_15840  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
CEQ48_04960  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CEQ48_04955  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
CEQ48_11135  catalase [KO:K03781] [EC:1.11.1.6]
CEQ48_06485  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
CEQ48_05895  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
CEQ48_16990  alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
CEQ48_19600  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CEQ48_14185  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CEQ48_01450  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CEQ48_01460  gcvP; glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
CEQ48_01435  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
CEQ48_05825  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CEQ48_06975  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CEQ48_01455  gcvH; glycine cleavage system protein H [KO:K02437]
CEQ48_14940  glycerate kinase [KO:K00865] [EC:2.7.1.165]
CEQ48_03665  glycerate kinase [KO:K00865] [EC:2.7.1.165]
CEQ48_17630  ketohydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CEQ48_01570  ketohydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CEQ48_11460  formate dehydrogenase iron-sulfur subunit [KO:K00124]
CEQ48_11465  formate dehydrogenase subunit gamma [KO:K00127]
CEQ48_09025  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
vti00010  Glycolysis / Gluconeogenesis
vti00020  Citrate cycle (TCA cycle)
vti00030  Pentose phosphate pathway
vti00053  Ascorbate and aldarate metabolism
vti00071  Fatty acid degradation
vti00230  Purine metabolism
vti00250  Alanine, aspartate and glutamate metabolism
vti00260  Glycine, serine and threonine metabolism
vti00620  Pyruvate metabolism
vti00710  Carbon fixation by Calvin cycle
vti00750  Vitamin B6 metabolism
vti00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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