KEGG   PATHWAY: vti00230
Entry
vti00230                    Pathway                                
Name
Purine metabolism - Vibrio tarriae
Class
Metabolism; Nucleotide metabolism
Pathway map
vti00230  Purine metabolism
vti00230

Module
vti_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vti00230]
vti_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vti00230]
vti_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vti00230]
vti_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vti00230]
vti_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vti00230]
Other DBs
GO: 0006163 0042278
Organism
Vibrio tarriae [GN:vti]
Gene
CEQ48_06860  ADP-ribose diphosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
CEQ48_04595  ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
CEQ48_19720  ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
CEQ48_07275  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
CEQ48_08490  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
CEQ48_08100  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
CEQ48_13890  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
CEQ48_17665  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
CEQ48_07815  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
CEQ48_12625  purT; phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
CEQ48_14550  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
CEQ48_07820  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
CEQ48_18905  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
CEQ48_18910  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
CEQ48_12820  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
CEQ48_13130  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
CEQ48_17660  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
CEQ48_13645  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
CEQ48_05320  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
CEQ48_08145  ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
CEQ48_16210  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
CEQ48_13115  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
CEQ48_04460  inosine/guanosine kinase [KO:K00892] [EC:2.7.1.73]
CEQ48_07280  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
CEQ48_02600  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
CEQ48_03380  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
CEQ48_15330  multi-copper polyphenol oxidoreductase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
CEQ48_15920  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
CEQ48_15035  IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
CEQ48_15090  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
CEQ48_15365  non-canonical purine NTP phosphatase [KO:K01529] [EC:3.6.1.73]
CEQ48_16535  non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
CEQ48_07585  xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
CEQ48_15030  GMP synthase (glutamine-hydrolyzing) [KO:K01951] [EC:6.3.5.2]
CEQ48_04045  guanosine monophosphate reductase [KO:K00364] [EC:1.7.1.7]
CEQ48_05515  guanylate kinase [KO:K00942] [EC:2.7.4.8]
CEQ48_12500  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
CEQ48_12505  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
CEQ48_05195  anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
CEQ48_09085  dGTPase [KO:K01129] [EC:3.1.5.1]
CEQ48_09090  5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
CEQ48_05505  bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
CEQ48_15240  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
CEQ48_17545  guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
CEQ48_06785  GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
CEQ48_19325  adenylate cyclase [KO:K05851] [EC:4.6.1.1]
CEQ48_06005  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
CEQ48_19575  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
CEQ48_14420  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
CEQ48_06210  cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
CEQ48_13970  adenylate kinase [KO:K00939] [EC:2.7.4.3]
CEQ48_06790  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
CEQ48_06870  3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
CEQ48_16655  bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [KO:K01525] [EC:3.6.1.41]
CEQ48_06230  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
CEQ48_06225  sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
CEQ48_06220  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
CEQ48_05380  gamma-glutamyltransferase [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
vti00030  Pentose phosphate pathway
vti00220  Arginine biosynthesis
vti00250  Alanine, aspartate and glutamate metabolism
vti00260  Glycine, serine and threonine metabolism
vti00340  Histidine metabolism
vti00630  Glyoxylate and dicarboxylate metabolism
vti00730  Thiamine metabolism
vti00740  Riboflavin metabolism
vti00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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