KEGG   PATHWAY: xbu03440
Entry
xbu03440                    Pathway                                
Name
Homologous recombination - Xenorhabdus budapestensis
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
xbu03440  Homologous recombination
xbu03440

Other DBs
GO: 0000724
Organism
Xenorhabdus budapestensis [GN:xbu]
Gene
HGO23_00010  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
HGO23_00015  recF; DNA replication/repair protein RecF [KO:K03629]
HGO23_01005  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
HGO23_01345  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
HGO23_02820  ssb; single-stranded DNA-binding protein [KO:K03111]
HGO23_03165  [KO:K02344] [EC:2.7.7.7]
HGO23_04770  [KO:K03111]
HGO23_05285  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
HGO23_06395  recO; DNA repair protein RecO [KO:K03584]
HGO23_08375  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
HGO23_08845  [KO:K02345] [EC:2.7.7.7]
HGO23_10695  ruvB; Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
HGO23_10700  ruvA; Holliday junction branch migration protein RuvA [KO:K03550]
HGO23_10705  ruvC; crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
HGO23_13745  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
HGO23_14085  recA; recombinase RecA [KO:K03553]
HGO23_14630  ssb; single-stranded DNA-binding protein [KO:K03111]
HGO23_15255  recJ; single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
HGO23_15990  recR; recombination protein RecR [KO:K06187]
HGO23_16000  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
HGO23_16010  [KO:K04067]
HGO23_16605  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
HGO23_16865  recD; exodeoxyribonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
HGO23_16870  recB; exodeoxyribonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
HGO23_16880  recC; exodeoxyribonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
HGO23_17395  [KO:K02339] [EC:2.7.7.7]
HGO23_17885  priB; primosomal replication protein N [KO:K02686]
HGO23_18795  priA; primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   

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