KEGG   PATHWAY: ype00240
Entry
ype00240                    Pathway                                
Name
Pyrimidine metabolism - Yersinia pestis CO92 (biovar Orientalis)
Class
Metabolism; Nucleotide metabolism
Pathway map
ype00240  Pyrimidine metabolism
ype00240

Module
ype_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ype00240]
ype_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ype00240]
ype_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ype00240]
ype_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ype00240]
Other DBs
GO: 0006220 0006213
Organism
Yersinia pestis CO92 (biovar Orientalis) [GN:ype]
Gene
YPO0482  b0033; carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
YPO0481  b0032; carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
YPO3588  pyrB; aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
YPO3589  pyrI; aspartate carbamoyltransferase regulatory chain [KO:K00610]
YPO1587  b1062; dihydroorotase [KO:K01465] [EC:3.5.2.3]
YPO1415  pyrD; dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
YPO0045  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
YPO2227  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
YPO1046  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
YPO2883  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
YPO3378  conserved hypothetical protein [KO:K04765] [EC:3.6.1.9]
YPO3668  yhdE; putative inhibitor of septum formation [KO:K06287] [EC:3.6.1.-]
YPO0586  conserved hypothetical protein [KO:K07043] [EC:3.6.1.-]
YPO3377  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
YPO1391  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
YPO2167  nudG; putative pyrophosphohydrolase [KO:K08320] [EC:3.6.1.65]
YPO1524  b2066; uridine kinase [KO:K00876] [EC:2.7.1.48]
YPO3358  surE; stationary-phase survival protein [KO:K03787] [EC:3.1.3.5 3.1.3.6]
YPO2624  nagD; putative N-acetylglucosamine metabolism protein [KO:K02566] [EC:3.1.3.5]
YPO2295  haloacid dehalogenase-like hydrolase family protein [KO:K08723] [EC:3.1.3.-]
YPO3786  udp; uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
YPO3213  conserved hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
YPO2827  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
YPO3530  cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor [KO:K01119] [EC:3.1.4.16 3.1.3.6]
YPO1033  conserved hypothetical protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
YPO1512  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
YPO0162  codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
YPO3454  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
YPO1525  b2065; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
YPO1214  dnaF; ribonucleoside-diphosphate reductase 1 alpha chain [KO:K00525] [EC:1.17.4.1]
YPO2649  nrdE; ribonucleoside-diphosphate reductase 2 alpha chain [KO:K00525] [EC:1.17.4.1]
YPO1213  ftsB; ribonucleoside-diphosphate reductase 1 beta chain [KO:K00526] [EC:1.17.4.1]
YPO2648  nrdF; ribonucleoside-diphosphate reductase 2 beta chain [KO:K00526] [EC:1.17.4.1]
YPO2559  conserved hypothetical protein [KO:K08722] [EC:3.1.3.89]
YPO1605  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
YPO0047  dnaS; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
YPO2176  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
YPO0783  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
ype00030  Pentose phosphate pathway
ype00220  Arginine biosynthesis
ype00250  Alanine, aspartate and glutamate metabolism
ype00280  Valine, leucine and isoleucine degradation
ype00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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