KEGG   PATHWAY: ypz00010
Entry
ypz00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Yersinia pestis Z176003
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ypz00010  Glycolysis / Gluconeogenesis
ypz00010

Module
ypz_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypz00010]
ypz_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypz00010]
ypz_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypz00010]
ypz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypz00010]
Other DBs
GO: 0006096 0006094
Organism
Yersinia pestis Z176003 [GN:ypz]
Gene
YPZ3_2622  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
YPZ3_3278  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
YPZ3_0071  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
YPZ3_3243  fbp; fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
YPZ3_0082  glpX; fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
YPZ3_0804  fbaA; fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
YPZ3_2204  hypothetical protein [KO:K01624] [EC:4.1.2.13]
YPZ3_0078  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
YPZ3_1687  glyceraldehyde 3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
YPZ3_0803  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
YPZ3_1028  gpmA; phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
YPZ3_0442  gpmB; phosphoglycerate mutase [KO:K15634] [EC:5.4.2.11]
YPZ3_0059  phosphoglyceromutase [KO:K15633] [EC:5.4.2.12]
YPZ3_2974  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
YPZ3_1760  pykA; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
YPZ3_1492  pykF; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
YPZ3_1478  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
YPZ3_3016  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
YPZ3_3015  aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
YPZ3_3458  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
YPZ3_3014  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
YPZ3_1543  nifJ; putative pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
YPZ3_1369  adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
YPZ3_1666  adhE; aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
YPZ3_0218  acs; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
YPZ3_1030  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
YPZ3_0025  phosphatase [KO:K20866] [EC:3.1.3.10]
YPZ3_2368  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
YPZ3_1688  hypothetical protein [KO:K01792] [EC:5.1.3.15]
YPZ3_0118  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
YPZ3_0145  putative glycosyl hydrolase [KO:K01222] [EC:3.2.1.86]
YPZ3_1151  bglA; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
YPZ3_2638  crr; glucose-specific PTS system enzyme IIA component [KO:K02777] [EC:2.7.1.-]
YPZ3_2081  ptsG; PTS system, glucose-specific IIBC component [KO:K02779] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ypz00020  Citrate cycle (TCA cycle)
ypz00030  Pentose phosphate pathway
ypz00500  Starch and sucrose metabolism
ypz00620  Pyruvate metabolism
ypz00640  Propanoate metabolism
ypz00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system