GFIT result for
sdw
|
GFIT result for
sdw
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| sdw:K7C20_34485 (337 a.a.) |
-- |
ligD; non-homologous end-joining DNA ligase | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > sanu:K7396_01895(337) | 336 | 97.0 | 2280 | 4 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > stud:STRTU_000317(337) | 337 | 94.7 | 2246 | 0 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > sauh:SU9_031980(337) | 337 | 94.7 | 2242 | 4 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > slc:SL103_20370(337) | 337 | 93.5 | 2218 | 5 | <- | ATP-dependent DNA ligase | |||
| > stro:STRMOE7_35270(337) | 337 | 93.2 | 2217 | 4 | <- | ATP-dependent DNA ligase | |||
| > spla:CP981_35720(331) | 331 | 94.9 | 2211 | 1 | <- | ATP-dependent DNA ligase | |||
| > snig:HEK616_39150(340) | 332 | 92.5 | 2185 | 3 | <- | ATP-dependent DNA ligase | |||
| > salu:DC74_7354(337) | 336 | 92.0 | 2179 | 5 | <- | hypothetical protein | |||
| > seng:OJ254_24625(?) | 332 | 92.2 | 2176 | 0 | -- | - | |||
| > sld:T261_0462(331) | 331 | 93.7 | 2175 | 6 | <- | hypothetical protein | |||
| > sall:SAZ_38070(331) | 330 | 92.1 | 2152 | 5 | <- | ATP-dependent DNA ligase | |||
| > sgv:B1H19_37050(336) | 334 | 91.9 | 2150 | 4 | <- | ATP-dependent DNA ligase | |||
| > stre:GZL_01248(337) | 336 | 89.6 | 2123 | 4 | <- | ATP-dependent DNA ligase | |||
| > shau:K9S39_02655(?) | 337 | 89.9 | 2122 | 0 | -- | - | |||
| > snr:SNOUR_05270(331) | 330 | 89.4 | 2093 | 6 | <- | DNA ligase D, polymerase domain | |||
| > svr:CP971_30320(338) | 332 | 81.9 | 1933 | 4 | <- | ATP-dependent DNA ligase | |||
| > kau:B6264_23585(338) | 332 | 81.6 | 1928 | 4 | <- | ATP-dependent DNA ligase | |||
| > syan:NRK68_28455(339) | 336 | 78.3 | 1874 | 1 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > slx:SLAV_07660(339) | 334 | 77.5 | 1873 | 2 | <- | ykoU1; putative ATP-dependent DNA ligase YkoU | |||
| > shun:DWB77_01452(338) | 335 | 77.6 | 1857 | 4 | <- | ligD_1; Multifunctional non-homologous end joining protein LigD | |||
| > ssub:CP968_06615(352) | 336 | 77.4 | 1854 | 3 | <- | ATP-dependent DNA ligase | |||
| > sgk:PET44_26435(?) | 338 | 76.3 | 1853 | 0 | -- | - | |||
| > sgz:C0216_10495(350) | 334 | 76.0 | 1845 | 4 | <- | ATP-dependent DNA ligase | |||
| > sxt:KPP03845_106085(351) | 336 | 76.8 | 1845 | 1 | <- | ligD_2; Multifunctional non-homologous end joining protein LigD | |||
| > sdx:C4B68_05115(337) | 331 | 77.0 | 1841 | 4 | -- | ATP-dependent DNA ligase | |||
| > strm:M444_27905(332) | 331 | 76.7 | 1837 | 3 | <- | ATP-dependent DNA ligase | |||
| > sgx:H4W23_32420(347) | 337 | 75.1 | 1827 | 4 | <- | DNA polymerase domain-containing protein | |||
| > sve:SVEN_6395(343) | 337 | 75.1 | 1827 | 4 | <- | ATP-dependent DNA ligase | |||
| > sfb:CP974_26715(335) | 331 | 77.9 | 1826 | 5 | <- | ATP-dependent DNA ligase | |||
| > kit:CFP65_0300(356) | 333 | 75.7 | 1824 | 3 | <- | ATP-dependent DNA ligase | |||
| > sfy:GFH48_08370(340) | 332 | 76.2 | 1823 | 2 | <- | ATP-dependent DNA ligase | |||
| > slia:HA039_04550(334) | 329 | 76.6 | 1821 | 5 | <- | DNA polymerase domain-containing protein | |||
| > snf:JYK04_06827(339) | 336 | 75.9 | 1820 | 3 | <- | ligD_2; Multifunctional non-homologous end joining protein LigD | |||
| > srn:A4G23_04998(331) | 330 | 77.6 | 1817 | 5 | <- | ykoU; putative ATP-dependent DNA ligase YkoU | |||
| > agla:OIE69_15715(?) | 333 | 76.0 | 1815 | 0 | -- | - | |||
| > sci:B446_30625(347) | 332 | 75.6 | 1814 | 4 | <- | hypothetical protein | |||
| > staa:LDH80_08040(342) | 337 | 74.8 | 1814 | 4 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > stir:DDW44_26985(373) | 333 | 74.8 | 1813 | 38 | <- | ATP-dependent DNA ligase | |||
| > svn:CP980_06115(352) | 334 | 74.0 | 1812 | 1 | <- | ATP-dependent DNA ligase | |||
| > sgrf:SGFS_027240(?) | 334 | 75.4 | 1811 | 0 | -- | - | |||
| > smob:J7W19_03000(347) | 333 | 76.3 | 1811 | 5 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > scyn:N8I84_34035(?) | 332 | 75.3 | 1810 | 0 | -- | - | |||
| > sma:SAVERM_1696(338) | 331 | 75.5 | 1810 | 1 | <- | putative DNA primase, small subunit | |||
| > slk:SLUN_33850(336) | 332 | 74.4 | 1807 | 2 | <- | ATP-dependent DNA ligase | |||
| > strf:ASR50_30230(337) | 331 | 74.9 | 1807 | 2 | <- | ATP-dependent DNA ligase | |||
| > speu:CGZ69_31465(337) | 334 | 75.1 | 1805 | 4 | <- | ATP-dependent DNA ligase | |||
| > sroc:RGF97_03870(?) | 337 | 73.9 | 1805 | 0 | -- | - | |||
| > salj:SMD11_6507(362) | 334 | 74.9 | 1803 | 15 | <- | ATP-dependent DNA ligase | |||
| > sct:SCAT_5514(335) | 334 | 75.4 | 1803 | 8 | <- | conserved protein of unknown function | |||
| > scy:SCATT_55170(335) | 334 | 75.4 | 1803 | 8 | <- | hypothetical protein | |||
| > slau:SLA_6344(331) | 330 | 75.2 | 1803 | 4 | <- | ATP-dependent DNA ligase | |||
| > snk:CP967_02530(341) | 330 | 75.2 | 1802 | 2 | -- | ATP-dependent DNA ligase | |||
| > kis:HUT16_34125(333) | 337 | 77.7 | 1801 | 1 | <- | DNA polymerase domain-containing protein | |||
| > sgf:HEP81_01215(339) | 334 | 74.6 | 1801 | 3 | <- | ATP-dependent DNA ligase | |||
| > smao:CAG99_01370(343) | 336 | 74.1 | 1801 | 7 | <- | ATP-dependent DNA ligase | |||
| > srj:SRO_1248(339) | 334 | 74.6 | 1801 | 2 | <- | hypothetical protein | |||
| > sast:CD934_03525(340) | 331 | 74.0 | 1797 | 3 | <- | ATP-dependent DNA ligase | |||
| > svt:SVTN_31290(342) | 337 | 73.3 | 1797 | 5 | -- | ATP-dependent DNA ligase | |||
| > stee:F3L20_14785(340) | 333 | 73.6 | 1795 | 0 | <- | DNA polymerase domain-containing protein | |||
| > strt:A8713_27130(343) | 331 | 74.0 | 1795 | 3 | <- | ATP-dependent DNA ligase | |||
| > sfiy:F0344_02935(?) | 329 | 74.8 | 1794 | 0 | -- | - | |||
| > shar:HUT13_25670(377) | 331 | 75.8 | 1794 | 30 | <- | DNA polymerase domain-containing protein | |||
| > spri:SPRI_1067(337) | 334 | 75.4 | 1792 | 2 | <- | DNA polymerase LigD polymerase subunit | |||
| > sspo:DDQ41_28285(364) | 332 | 73.2 | 1791 | 6 | <- | ATP-dependent DNA ligase | |||
| > spad:DVK44_30635(332) | 329 | 76.0 | 1789 | 8 | <- | ATP-dependent DNA ligase | |||
| > ssx:SACTE_5877(337) | 330 | 74.8 | 1789 | 2 | <- | DNA polymerase LigD, polymerase domain protein | |||
| > sauo:BV401_38205(334) | 331 | 74.3 | 1788 | 5 | <- | ATP-dependent DNA ligase | |||
| > sclf:BB341_03015(338) | 332 | 73.5 | 1788 | 2 | <- | ATP-dependent DNA ligase | |||
| > smal:SMALA_6914(334) | 331 | 74.3 | 1788 | 6 | <- | DNA primase small subunit | |||
| > srim:CP984_04240(334) | 333 | 73.9 | 1788 | 8 | <- | ATP-dependent DNA ligase | |||
| > ssoi:I1A49_38350(334) | 331 | 74.3 | 1788 | 6 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > srk:FGW37_31595(342) | 332 | 75.3 | 1787 | 5 | <- | ATP-dependent DNA ligase | |||
| > sgd:ELQ87_05555(338) | 332 | 74.1 | 1786 | 2 | <- | ATP-dependent DNA ligase | |||
| > slai:P8A22_04430(?) | 329 | 74.2 | 1785 | 0 | -- | - | |||
| > src:M271_07565(334) | 331 | 74.3 | 1783 | 10 | <- | ATP-dependent DNA ligase | |||
| > sant:QR300_06655(?) | 333 | 74.2 | 1781 | 0 | -- | - | |||
| > sata:C5746_35570(336) | 329 | 73.9 | 1781 | 4 | <- | ATP-dependent DNA ligase | |||
| > sdrz:NEH16_03600(336) | 330 | 75.2 | 1781 | 3 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > sfa:Sfla_0696(336) | 330 | 73.9 | 1781 | 4 | <- | DNA polymerase LigD, polymerase domain protein | |||
| > sfi:SFUL_6474(345) | 336 | 74.1 | 1781 | 3 | <- | putative eukaryotic-type DNA primase | |||
| > strp:F750_6168(336) | 330 | 73.9 | 1781 | 4 | <- | ATP-dependent DNA ligase | |||
| > scw:TU94_28790(341) | 332 | 74.7 | 1780 | 4 | <- | ATP-dependent DNA ligase | |||
| > sroi:IAG44_06405(337) | 331 | 74.3 | 1780 | 10 | <- | DNA polymerase domain-containing protein | |||
| > stsu:B7R87_29220(345) | 337 | 72.7 | 1780 | 3 | <- | ATP-dependent DNA ligase | |||
| > salb:XNR_0333(339) | 334 | 74.0 | 1779 | 4 | <- | DNA polymerase LigD, polymerase domain-containing protein | |||
| > svio:HWN34_02580(342) | 334 | 74.0 | 1779 | 4 | -- | DNA polymerase domain-containing protein | |||
| > saqu:EJC51_39165(339) | 332 | 74.4 | 1778 | 4 | <- | ATP-dependent DNA ligase | |||
| > slf:JEQ17_09005(342) | 332 | 74.1 | 1778 | 4 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > kab:B7C62_32400(340) | 329 | 74.5 | 1777 | 5 | <- | ATP-dependent DNA ligase | |||
| > sdur:M4V62_07985(337) | 333 | 73.6 | 1777 | 3 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > sle:sle_11170(341) | 332 | 74.4 | 1777 | 4 | <- | sle_11170; Probable ATP-dependent DNA ligase ykoU | |||
| > snw:BBN63_04690(343) | 336 | 75.3 | 1776 | 3 | <- | ATP-dependent DNA ligase | |||
| > sphv:F9278_40495(336) | 332 | 74.4 | 1776 | 2 | <- | DNA polymerase domain-containing protein | |||
| > sky:D0C37_03185(345) | 334 | 73.7 | 1775 | 5 | <- | ATP-dependent DNA ligase | |||
| > sakb:K1J60_05585(336) | 332 | 73.8 | 1771 | 4 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > ska:CP970_04815(343) | 330 | 74.2 | 1771 | 8 | <- | ATP-dependent DNA ligase | |||
| > sqz:FQU76_29090(351) | 337 | 72.4 | 1771 | 4 | <- | DNA polymerase domain-containing protein | |||
| > sxi:SXIM_50850(338) | 331 | 75.2 | 1771 | 2 | <- | DNA polymerase LigD, polymerase domain protein | |||
| > sbh:SBI_08909(334) | 333 | 73.9 | 1770 | 1 | <- | hypothetical protein | |||
| > scb:SCAB_13581(336) | 332 | 74.1 | 1770 | 4 | <- | conserved hypothetical protein | |||