KEGG   PATHWAY: amd00010
Entry
amd00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Amycolatopsis mediterranei U32
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
amd00010  Glycolysis / Gluconeogenesis
amd00010

Module
amd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:amd00010]
amd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:amd00010]
amd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:amd00010]
amd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:amd00010]
Other DBs
GO: 0006096 0006094
Organism
Amycolatopsis mediterranei U32 [GN:amd]
Gene
AMED_0444  adh; alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
AMED_0456  gpm; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
AMED_0540  korB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
AMED_0541  korA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
AMED_0881  [KO:K00128] [EC:1.2.1.3]
AMED_1157  celF; 6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
AMED_1342  celF; 6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
AMED_1401  [KO:K00128] [EC:1.2.1.3]
AMED_1985  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
AMED_2113  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
AMED_2168  sucB; 2-oxoglutarate dehydrogenase E2 component [KO:K00627] [EC:2.3.1.12]
AMED_2169  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMED_2451  glk; glucokinase [KO:K25026]
AMED_2460  pfk; 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
AMED_2469  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
AMED_2602  ppgK; polyphosphate glucokinase [KO:K00886] [EC:2.7.1.63]
AMED_2728  nagE; PTS system, glucose/maltose/N-acetylglucosamine-specific IIA component [KO:K02777] [EC:2.7.1.-]
AMED_2798  gapA; glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
AMED_2799  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
AMED_2800  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
AMED_2807  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
AMED_3363  galM; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
AMED_3450  adh; alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
AMED_3504  adh; alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
AMED_3833  [KO:K00128] [EC:1.2.1.3]
AMED_3841  bioW; 6-carboxyhexanoate-CoA ligase [KO:K24012]
AMED_3923  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
AMED_3996  adh; alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
AMED_4996  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AMED_5340  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AMED_6934  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMED_7041  glk; glucokinase [KO:K25026]
AMED_7134  [KO:K00128] [EC:1.2.1.3]
AMED_7209  [KO:K00128] [EC:1.2.1.3]
AMED_7375  adh; alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
AMED_8059  glpX; fructose-1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
AMED_8143  eno; enolase [KO:K01689] [EC:4.2.1.11]
AMED_8200  eno; enolase [KO:K01689] [EC:4.2.1.11]
AMED_8434  galM; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
AMED_8817  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AMED_9110  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
AMED_9253  pckA; phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
amd00020  Citrate cycle (TCA cycle)
amd00030  Pentose phosphate pathway
amd00500  Starch and sucrose metabolism
amd00620  Pyruvate metabolism
amd00640  Propanoate metabolism
amd00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

DBGET integrated database retrieval system