KEGG   PATHWAY: ath00010
Entry
ath00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Arabidopsis thaliana (thale cress)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ath00010  Glycolysis / Gluconeogenesis
ath00010

Module
ath_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ath00010]
ath_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ath00010]
ath_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ath00010]
ath_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ath00010]
Other DBs
GO: 0006096 0006094
Organism
Arabidopsis thaliana (thale cress) [GN:ath]
Gene
AT1G01090  PDH-E1_ALPHA; pyruvate dehydrogenase E1 alpha [KO:K00161] [EC:1.2.4.1]
AT1G09780  iPGAM1; Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
AT1G09870  [KO:K03103] [EC:3.1.3.62 3.1.3.80]
AT1G12000  [KO:K00895] [EC:2.7.1.90]
AT1G13440  GAPC2; glyceraldehyde-3-phosphate dehydrogenase C2 [KO:K00134] [EC:1.2.1.12]
AT1G16300  GAPCP-2; glyceraldehyde-3-phosphate dehydrogenase of plastid 2 [KO:K00134] [EC:1.2.1.12]
AT1G20950  [KO:K00895] [EC:2.7.1.90]
AT1G22170  [KO:K01834] [EC:5.4.2.11]
AT1G22430  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
AT1G22440  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
AT1G23190  PGM3; Phosphoglucomutase/phosphomannomutase family protein [KO:K01835] [EC:5.4.2.2]
AT1G23800  ALDH2B7; aldehyde dehydrogenase 2B7 [KO:K00128] [EC:1.2.1.3]
AT1G24180  IAR4; thiamine diphosphate-binding fold (THDP-binding) superfamily protein [KO:K00161] [EC:1.2.4.1]
AT1G30120  PDH-E1_BETA; pyruvate dehydrogenase E1 beta [KO:K00162] [EC:1.2.4.1]
AT1G32440  PKp3; plastidial pyruvate kinase 3 [KO:K00873] [EC:2.7.1.40]
AT1G32780  [KO:K00001] [EC:1.1.1.1]
AT1G34430  EMB3003; 2-oxoacid dehydrogenases acyltransferase family protein [KO:K00627] [EC:2.3.1.12]
AT1G43670  FBP; Inositol monophosphatase family protein [KO:K03841] [EC:3.1.3.11]
AT1G44170  ALDH3H1; aldehyde dehydrogenase 3H1 [KO:K00128] [EC:1.2.1.3]
AT1G47840  HXK3; hexokinase 3 [KO:K00844] [EC:2.7.1.1]
AT1G48030  mtLPD1; mitochondrial lipoamide dehydrogenase 1 [KO:K00382] [EC:1.8.1.4]
AT1G50460  HKL1; hexokinase-like 1 [KO:K00844] [EC:2.7.1.1]
AT1G54100  ALDH7B4; aldehyde dehydrogenase 7B4 [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
AT1G54220  [KO:K00627] [EC:2.3.1.12]
AT1G56190  [KO:K00927] [EC:2.7.2.3]
AT1G59900  E1_ALPHA; pyruvate dehydrogenase complex E1 alpha subunit [KO:K00161] [EC:1.2.4.1]
AT1G64710  [KO:K00001] [EC:1.1.1.1]
AT1G70730  PGM2; Phosphoglucomutase/phosphomannomutase family protein [KO:K01835] [EC:5.4.2.2]
AT1G74030  ENO1; enolase 1 [KO:K01689] [EC:4.2.1.11]
AT1G76550  [KO:K00895] [EC:2.7.1.90]
AT1G77120  ADH1; alcohol dehydrogenase 1 [KO:K18857] [EC:1.1.1.1]
AT1G78050  PGM; phosphoglycerate/bisphosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
AT1G79530  GAPCP-1; glyceraldehyde-3-phosphate dehydrogenase of plastid 1 [KO:K00134] [EC:1.2.1.12]
AT1G79550  PGK; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
AT2G01140  PDE345; Aldolase superfamily protein [KO:K01623] [EC:4.1.2.13]
AT2G19860  HXK2; hexokinase 2 [KO:K00844] [EC:2.7.1.1]
AT2G21170  TIM; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
AT2G21330  FBA1; fructose-bisphosphate aldolase 1 [KO:K01623] [EC:4.1.2.13]
AT2G22480  PFK5; phosphofructokinase 5 [KO:K00850] [EC:2.7.1.11]
AT2G24270  ALDH11A3; aldehyde dehydrogenase 11A3 [KO:K00131] [EC:1.2.1.9]
AT2G29560  ENOC; cytosolic enolase [KO:K01689] [EC:4.2.1.11]
AT2G34590  [KO:K00162] [EC:1.2.4.1]
AT2G36460  FBA6; Aldolase superfamily protein [KO:K01623] [EC:4.1.2.13]
AT2G36530  LOS2; Enolase [KO:K01689] [EC:4.2.1.11]
AT2G36580  [KO:K00873] [EC:2.7.1.40]
AT2G37790  AKR4C10; NAD(P)-linked oxidoreductase superfamily protein [KO:K00002] [EC:1.1.1.2]
AT3G01260  [KO:K01785] [EC:5.1.3.3]
AT3G01590  [KO:K01792] [EC:5.1.3.15]
AT3G04050  [KO:K00873] [EC:2.7.1.40]
AT3G04120  GAPC1; glyceraldehyde-3-phosphate dehydrogenase C subunit 1 [KO:K00134] [EC:1.2.1.12]
AT3G08590  iPGAM2; Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
AT3G12780  PGK1; phosphoglycerate kinase 1 [KO:K00927] [EC:2.7.2.3]
AT3G13930  [KO:K00627] [EC:2.3.1.12]
AT3G16910  AAE7; acyl-activating enzyme 7 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
AT3G16950  LPD1; lipoamide dehydrogenase 1 [KO:K00382] [EC:1.8.1.4]
AT3G17240  mtLPD2; lipoamide dehydrogenase 2 [KO:K00382] [EC:1.8.1.4]
AT3G17940  [KO:K01785] [EC:5.1.3.3]
AT3G20040  ATHXK4; Hexokinase [KO:K00844] [EC:2.7.1.1]
AT3G22960  PKP-ALPHA; Pyruvate kinase family protein [KO:K00873] [EC:2.7.1.40]
AT3G25860  LTA2; 2-oxoacid dehydrogenases acyltransferase family protein [KO:K00627] [EC:2.3.1.12]
AT3G25960  [KO:K00873] [EC:2.7.1.40]
AT3G47800  [KO:K01785] [EC:5.1.3.3]
AT3G48000  ALDH2B4; aldehyde dehydrogenase 2B4 [KO:K00128] [EC:1.2.1.3]
AT3G49160  [KO:K00873] [EC:2.7.1.40]
AT3G50520  [KO:K15634] [EC:5.4.2.11]
AT3G52200  LTA3; Dihydrolipoamide acetyltransferase, long form protein [KO:K00627] [EC:2.3.1.12]
AT3G52930  FBA8; Aldolase superfamily protein [KO:K01623] [EC:4.1.2.13]
AT3G52990  [KO:K00873] [EC:2.7.1.40]
AT3G54050  HCEF1; high cyclic electron flow 1 [KO:K03841] [EC:3.1.3.11]
AT3G55440  TPI; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
AT3G55650  [KO:K00873] [EC:2.7.1.40]
AT3G55810  [KO:K00873] [EC:2.7.1.40]
AT3G61610  [KO:K01792] [EC:5.1.3.15]
AT4G04040  MEE51; Phosphofructokinase family protein [KO:K00895] [EC:2.7.1.90]
AT4G15530  PPDK; pyruvate orthophosphate dikinase [KO:K01006] [EC:2.7.9.1]
AT4G16155  [KO:K00382] [EC:1.8.1.4]
AT4G17260  [KO:K00016] [EC:1.1.1.27]
AT4G22110  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
AT4G23730  [KO:K01792] [EC:5.1.3.15]
AT4G24620  PGI1; phosphoglucose isomerase 1 [KO:K01810] [EC:5.3.1.9]
AT4G25900  [KO:K01792] [EC:5.1.3.15]
AT4G26270  PFK3; phosphofructokinase 3 [KO:K00850] [EC:2.7.1.11]
AT4G26390  [KO:K00873] [EC:2.7.1.40]
AT4G26520  FBA7; Aldolase superfamily protein [KO:K01623] [EC:4.1.2.13]
AT4G26530  FBA5; Aldolase superfamily protein [KO:K01623] [EC:4.1.2.13]
AT4G29130  HXK1; hexokinase 1 [KO:K00844] [EC:2.7.1.1]
AT4G29220  PFK1; phosphofructokinase 1 [KO:K00850] [EC:2.7.1.11]
AT4G32840  PFK6; phosphofructokinase 6 [KO:K00850] [EC:2.7.1.11]
AT4G33070  [KO:K01568] [EC:4.1.1.1]
AT4G34240  ALDH3I1; aldehyde dehydrogenase 3I1 [KO:K00128] [EC:1.2.1.3]
AT4G36250  ALDH3F1; aldehyde dehydrogenase 3F1 [KO:K00128] [EC:1.2.1.3]
AT4G37840  HKL3; hexokinase-like 3 [KO:K00844] [EC:2.7.1.1]
AT4G37870  PCK1; phosphoenolpyruvate carboxykinase 1 [KO:K01610] [EC:4.1.1.49]
AT4G38970  FBA2; fructose-bisphosphate aldolase 2 [KO:K01623] [EC:4.1.2.13]
AT5G01320  [KO:K01568] [EC:4.1.1.1]
AT5G01330  PDC3; pyruvate decarboxylase-3 [KO:K01568] [EC:4.1.1.1]
AT5G01670  [KO:K00002] [EC:1.1.1.2]
AT5G03690  FBA4; Aldolase superfamily protein [KO:K01623] [EC:4.1.2.13]
AT5G08570  [KO:K00873] [EC:2.7.1.40]
AT5G14500  [KO:K01792] [EC:5.1.3.15]
AT5G15140  [KO:K01785] [EC:5.1.3.3]
AT5G24760  [KO:K00001] [EC:1.1.1.1]
AT5G36880  ACS; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AT5G42250  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
AT5G42740  [KO:K01810] [EC:5.3.1.9]
AT5G43940  HOT5; GroES-like zinc-binding dehydrogenase family protein [KO:K00121] [EC:1.1.1.284 1.1.1.1]
AT5G47810  PFK2; phosphofructokinase 2 [KO:K00850] [EC:2.7.1.11]
AT5G50850  MAB1; Transketolase family protein [KO:K00162] [EC:1.2.4.1]
AT5G51820  PGM; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
AT5G52920  PKP-BETA1; plastidic pyruvate kinase beta subunit 1 [KO:K00873] [EC:2.7.1.40]
AT5G54960  PDC2; pyruvate decarboxylase-2 [KO:K01568] [EC:4.1.1.1]
AT5G56350  [KO:K00873] [EC:2.7.1.40]
AT5G56630  PFK7; phosphofructokinase 7 [KO:K00850] [EC:2.7.1.11]
AT5G57330  [KO:K01792] [EC:5.1.3.15]
AT5G61580  PFK4; phosphofructokinase 4 [KO:K00850] [EC:2.7.1.11]
AT5G63680  [KO:K00873] [EC:2.7.1.40]
AT5G64380  [KO:K03841] [EC:3.1.3.11]
AT5G65690  PCK2; phosphoenolpyruvate carboxykinase 2 [KO:K01610] [EC:4.1.1.49]
AT5G66530  [KO:K01792] [EC:5.1.3.15]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ath00020  Citrate cycle (TCA cycle)
ath00030  Pentose phosphate pathway
ath00500  Starch and sucrose metabolism
ath00620  Pyruvate metabolism
ath00640  Propanoate metabolism
ath00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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