KEGG   PATHWAY: bpt00630
Entry
bpt00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Bordetella petrii
Class
Metabolism; Carbohydrate metabolism
Pathway map
bpt00630  Glyoxylate and dicarboxylate metabolism
bpt00630

Module
bpt_M00012  Glyoxylate cycle [PATH:bpt00630]
bpt_M00621  Glycine cleavage system [PATH:bpt00630]
Other DBs
GO: 0046487 0043648
Organism
Bordetella petrii [GN:bpt]
Gene
Bpet0057  fadA1; beta-ketoadipyl CoA thiolase [KO:K00626] [EC:2.3.1.9]
Bpet0321  gph; conserved hypothetical protein [KO:K01091] [EC:3.1.3.18]
Bpet0345  [KO:K03781] [EC:1.11.1.6]
Bpet0402  ttdA; fumarate hydratase alpha subunit [KO:K03779] [EC:4.2.1.32]
Bpet0403  ttdB; L-tartrate dehydratase, subunit B [KO:K03780] [EC:4.2.1.32]
Bpet0614  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Bpet0763  glxK; glxK [KO:K00865] [EC:2.7.1.165]
Bpet0857  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Bpet0875  kdgA; KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Bpet0885  [KO:K00626] [EC:2.3.1.9]
Bpet1154  pccA; putative biotin carboxylase subunit of propionyl-CoA carboxylase [KO:K01965] [EC:6.4.1.3]
Bpet1284  [KO:K01647] [EC:2.3.3.1]
Bpet1515  [KO:K00382] [EC:1.8.1.4]
Bpet1744  [KO:K01091] [EC:3.1.3.18]
Bpet1782  [KO:K01895] [EC:6.2.1.1]
Bpet1807  [KO:K01895] [EC:6.2.1.1]
Bpet1816  prpC; 2-methylcitrate synthase [KO:K01659] [EC:2.3.3.5]
Bpet1818  mdh1; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Bpet1825  gltA; gltA [KO:K01647] [EC:2.3.3.1]
Bpet1834  odhL; 2-oxoglutarate dehydrogenase complex, E3 component [KO:K00382] [EC:1.8.1.4]
Bpet1850  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
Bpet2194  fadA3; fadA3 [KO:K00626] [EC:2.3.1.9]
Bpet2274  glnA; glnA [KO:K01915] [EC:6.3.1.2]
Bpet2538  pdhD; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Bpet2734  glcF; Glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
Bpet2735  glcE; Glycolate oxidase subunit [KO:K11472] [EC:1.1.99.14]
Bpet2736  glcD; Glycolate oxidase subunit [KO:K00104] [EC:1.1.99.14]
Bpet2878  [KO:K01647] [EC:2.3.3.1]
Bpet3017  [KO:K00382] [EC:1.8.1.4]
Bpet3077  yeaU1; tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Bpet3096  ycdW1; putative 2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Bpet3150  [KO:K07130] [EC:3.5.1.9]
Bpet3205  [KO:K17865] [EC:4.2.1.55]
Bpet3206  [KO:K17865] [EC:4.2.1.55]
Bpet3251  aceA; aceA [KO:K01637] [EC:4.1.3.1 4.1.3.30]
Bpet3286  fadA6; fadA6 [KO:K00626] [EC:2.3.1.9]
Bpet3354  acnB; Aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
Bpet3365  acnA2; putative aconitate hydratase [KO:K27802]
Bpet3410  fadA7; putative 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
Bpet3508  [KO:K00382] [EC:1.8.1.4]
Bpet3683  fdsG; NAD-dependent formate dehydrogenase gamma subunit [KO:K00127]
Bpet3684  fdsB; NAD-dependent formate dehydrogenase beta subunit [KO:K00124]
Bpet3685  fdsA; NAD-dependent formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
Bpet3687  fdsD; NAD-dependent formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
Bpet3694  hutG2; conserved hypothetical protein [KO:K01458] [EC:3.5.1.68]
Bpet3784  [KO:K01647] [EC:2.3.3.1]
Bpet4074  gcvP; glycine cleavage system P protein [KO:K00281] [EC:1.4.4.2]
Bpet4075  gcvH; glycine cleavage system H protein [KO:K02437]
Bpet4076  gcvT; glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Bpet4135  [KO:K03781] [EC:1.11.1.6]
Bpet4181  fadA9; fadA9 [KO:K00626] [EC:2.3.1.9]
Bpet4350  [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
Bpet4367  [KO:K00626] [EC:2.3.1.9]
Bpet4476  yeaU2; tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Bpet4659  fdhC; Formate dehydrogenase subunit C precursor [KO:K00127]
Bpet4661  fdhB; Formate dehydrogenase, iron-sulfur subunit [KO:K00124]
Bpet4662  fdhA; Formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
Bpet4725  [KO:K01091] [EC:3.1.3.18]
Bpet4731  [KO:K05825] [EC:2.6.1.-]
Bpet4860  [KO:K05825] [EC:2.6.1.-]
Bpet4866  glcB; Malate synthase G [KO:K01638] [EC:2.3.3.9]
Bpet4875  ycdW2; putative 2-hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Bpet4899  [KO:K03781] [EC:1.11.1.6]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00049  L-Aspartate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C05840  Iminoaspartate
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C19838  D-erythro-3-Hydroxyaspartate
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bpt00010  Glycolysis / Gluconeogenesis
bpt00020  Citrate cycle (TCA cycle)
bpt00030  Pentose phosphate pathway
bpt00053  Ascorbate and aldarate metabolism
bpt00071  Fatty acid degradation
bpt00230  Purine metabolism
bpt00250  Alanine, aspartate and glutamate metabolism
bpt00260  Glycine, serine and threonine metabolism
bpt00270  Cysteine and methionine metabolism
bpt00620  Pyruvate metabolism
bpt00710  Carbon fixation by Calvin cycle
bpt00750  Vitamin B6 metabolism
bpt00910  Nitrogen metabolism
KO pathway
ko00630   

DBGET integrated database retrieval system