KEGG   PATHWAY: cel00240
Entry
cel00240                    Pathway                                
Name
Pyrimidine metabolism - Caenorhabditis elegans (nematode)
Class
Metabolism; Nucleotide metabolism
Pathway map
cel00240  Pyrimidine metabolism
cel00240

Module
cel_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:cel00240]
cel_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:cel00240]
cel_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cel00240]
cel_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cel00240]
Other DBs
GO: 0006220 0006213
Organism
Caenorhabditis elegans (nematode) [GN:cel]
Gene
CELE_B0001.4  B0001.4; putative uridine-cytidine kinase [KO:K00876] [EC:2.7.1.48]
CELE_C03C10.3  rnr-2; Ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
CELE_C25F6.3  dpyd-1; Dihydropyrimidine dehydrogenase [NADP(+)] [KO:K00207] [EC:1.3.1.2]
CELE_C29F7.3  C29F7.3; UMP-CMP kinase 1 [KO:K13800] [EC:2.7.4.14]
CELE_C47D2.2  cdd-1; Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
CELE_C47E12.8  dhp-2; Dihydropyrimidinase 2 [KO:K01464] [EC:3.5.2.2]
CELE_D2085.1  pyr-1; Glutamine-dependent carbamoyl-phosphate synthase [KO:K11540] [EC:6.3.5.5 2.1.3.2 3.5.2.3]
CELE_F08C6.6  apy-1; Apyrase apy-1 [KO:K12304] [EC:3.6.1.6]
CELE_F13H8.7  upb-1; CN hydrolase domain-containing protein [KO:K01431] [EC:3.5.1.6]
CELE_F19B6.1  F19B6.1; Uridine kinase [KO:K00876] [EC:2.7.1.48]
CELE_F25B5.3  F25B5.3; Putative cytosolic 5'-nucleotidase 3 [KO:K24242]
CELE_F25H2.5  ndk-1; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
CELE_F40F8.1  F40F8.1; UMP-CMP kinase [KO:K13800] [EC:2.7.4.14]
CELE_F45F2.9  F45F2.9; 5'-deoxynucleotidase HDDC2 [KO:K07023] [EC:3.1.3.89]
CELE_F49E8.4  cdd-2; Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
CELE_K07A1.2  dut-1; dUTPase-like domain-containing protein [KO:K01520] [EC:3.6.1.23]
CELE_K08H10.4  uda-1; Nucleoside-diphosphatase uda-1 [KO:K01511] [EC:3.6.1.6]
CELE_R05G6.5  R05G6.5; Uroporphyrinogen-III synthase [KO:K00940] [EC:2.7.4.6]
CELE_R06C7.3  dhp-1; Dihydropyrimidinase 1 [KO:K01464] [EC:3.5.2.2]
CELE_R07E4.4  mig-23; Nucleoside-diphosphatase mig-23 [KO:K12305] [EC:3.6.1.6]
CELE_R53.2  dtmk-1; Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
CELE_T07C4.1  umps-1; Orotidine 5'-phosphate decarboxylase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
CELE_T23G5.1  rnr-1; Ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
CELE_T24C12.3  T24C12.3; Carbohydrate kinase PfkB domain-containing protein [KO:K16330] [EC:4.2.1.70 2.7.1.83]
CELE_W02D3.2  dhod-1; Dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
CELE_W06H3.3  ctps-1; CTP synthase [KO:K01937] [EC:6.3.4.2]
CELE_Y10G11A.1  Y10G11A.1; 5'-nucleotidase [KO:K24242]
CELE_Y37H9A.6  ndx-4; Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] [KO:K01518] [EC:3.6.1.17]
CELE_Y43C5A.5  thk-1; Thymidine kinase [KO:K00857] [EC:2.7.1.21]
CELE_Y71H10B.1  Y71H10B.1; Cytosolic purine 5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
CELE_ZK563.7  ZK563.7; Apyrase [KO:K12304] [EC:3.6.1.6]
CELE_ZK643.2  ZK643.2; putative deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
CELE_ZK783.2  upp-1; Uridine and thymidine phosphorylase [KO:K00757] [EC:2.4.2.3]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
cel00030  Pentose phosphate pathway
cel00220  Arginine biosynthesis
cel00250  Alanine, aspartate and glutamate metabolism
cel00280  Valine, leucine and isoleucine degradation
cel00410  beta-Alanine metabolism
KO pathway
ko00240   

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