KEGG   PATHWAY: cfir00240
Entry
cfir00240                   Pathway                                
Name
Pyrimidine metabolism - Cytobacillus firmus
Class
Metabolism; Nucleotide metabolism
Pathway map
cfir00240  Pyrimidine metabolism
cfir00240

Module
cfir_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cfir00240]
cfir_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cfir00240]
Other DBs
GO: 0006220 0006213
Organism
Cytobacillus firmus [GN:cfir]
Gene
NAF01_07125  carbamoyl phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
NAF01_08855  carB; carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
NAF01_07120  carbamoyl phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
NAF01_08850  carbamoyl phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
NAF01_08840  aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
NAF01_08845  dihydroorotase [KO:K01465] [EC:3.5.2.3]
NAF01_08865  dihydroorotate dehydrogenase [KO:K17828] [EC:1.3.1.14]
NAF01_08860  dihydroorotate dehydrogenase electron transfer subunit [KO:K02823]
NAF01_08875  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
NAF01_08870  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
NAF01_09365  pyrH; UMP kinase [KO:K09903] [EC:2.7.4.22]
NAF01_17565  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
NAF01_19480  Maf family protein [KO:K06287] [EC:3.6.1.-]
NAF01_23985  CTP synthase [KO:K01937] [EC:6.3.4.2]
NAF01_17660  cmk; (d)CMP kinase [KO:K00945] [EC:2.7.4.25]
NAF01_19070  udk; uridine kinase [KO:K00876] [EC:2.7.1.48]
NAF01_02685  5'-nucleotidase C-terminal domain-containing protein [KO:K01081] [EC:3.1.3.5]
NAF01_04870  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K08693] [EC:3.1.4.16 3.1.3.6 3.1.3.5]
NAF01_22975  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K08693] [EC:3.1.4.16 3.1.3.6 3.1.3.5]
NAF01_23855  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
NAF01_08830  pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR [KO:K02825] [EC:2.4.2.9]
NAF01_08020  bifunctional metallophosphatase/5'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
NAF01_11985  metallophosphoesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
NAF01_09590  TIGR00282 family metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
NAF01_05250  pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
NAF01_17935  pyrimidine-nucleoside phosphorylase [KO:K00756] [EC:2.4.2.2]
NAF01_03290  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
NAF01_18795  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
NAF01_23320  cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
NAF01_16385  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
NAF01_18395  vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
NAF01_16380  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
NAF01_00105  deoxynucleoside kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
NAF01_18945  ComE operon protein 2 [KO:K01493] [EC:3.5.4.12]
NAF01_00195  tmk; dTMP kinase [KO:K00943] [EC:2.7.4.9]
NAF01_23940  thymidine kinase [KO:K00857] [EC:2.7.1.21]
NAF01_16945  thymidylate synthase [KO:K00560] [EC:2.1.1.45]
NAF01_11060  allB; allantoinase AllB [KO:K01464] [EC:3.5.2.2]
NAF01_23345  M20 family metallo-hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
cfir00030  Pentose phosphate pathway
cfir00220  Arginine biosynthesis
cfir00250  Alanine, aspartate and glutamate metabolism
cfir00280  Valine, leucine and isoleucine degradation
cfir00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

DBGET integrated database retrieval system