KEGG   PATHWAY: chrb00010
Entry
chrb00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Chromobacterium phragmitis IIBBL 274-1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
chrb00010  Glycolysis / Gluconeogenesis
chrb00010

Module
chrb_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:chrb00010]
chrb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:chrb00010]
chrb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:chrb00010]
Other DBs
GO: 0006096 0006094
Organism
Chromobacterium phragmitis IIBBL 274-1 [GN:chrb]
Gene
DK843_14230  glucokinase [KO:K00845] [EC:2.7.1.2]
DK843_02090  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DK843_14240  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DK843_21485  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
DK843_02365  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
DK843_13970  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
DK843_17650  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
DK843_07440  hypothetical protein [KO:K00134] [EC:1.2.1.12]
DK843_13950  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DK843_11985  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DK843_13955  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DK843_06315  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
DK843_07165  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
DK843_07715  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
DK843_13650  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DK843_09105  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
DK843_12240  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
DK843_12235  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
DK843_18380  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DK843_12230  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DK843_00430  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DK843_11180  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
DK843_18685  bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
DK843_03540  L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
DK843_12925  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
DK843_06565  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DK843_20110  galactose-1-epimerase [KO:K01785] [EC:5.1.3.3]
DK843_05340  hypothetical protein [KO:K20866] [EC:3.1.3.10]
DK843_00840  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
DK843_13310  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
DK843_17845  PTS glucose transporter subunit IIBC [KO:K02779] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
chrb00020  Citrate cycle (TCA cycle)
chrb00030  Pentose phosphate pathway
chrb00500  Starch and sucrose metabolism
chrb00620  Pyruvate metabolism
chrb00640  Propanoate metabolism
chrb00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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