KEGG   PATHWAY: chx03050
Entry
chx03050                    Pathway                                
Name
Proteasome - Capra hircus (goat)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
chx03050  Proteasome
chx03050

Other DBs
GO: 0000502
Organism
Capra hircus (goat) [GN:chx]
Gene
100860815  IFNG; interferon gamma precursor [KO:K04687]
100860840  PSMA6; proteasome subunit alpha type-6 [KO:K02730] [EC:3.4.25.1]
102168353  PSMA3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
102169405  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 isoform X1 [KO:K06693]
102172642  PSMA7; proteasome subunit alpha type-7 isoform X1 [KO:K02731] [EC:3.4.25.1]
102173481  PSMF1; proteasome inhibitor PI31 subunit isoform X1 [KO:K06700]
102173623  PSMD4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
102174744  PSMB11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
102174773  PSMD7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
102175024  PSMB5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
102175796  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
102176071  PSMC5; 26S protease regulatory subunit 8 [KO:K03066]
102176558  PSMD3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
102176723  PSMD8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
102176996  PSMB6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
102178323  PSMB4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
102179390  PSME1; proteasome activator complex subunit 1 [KO:K06696]
102180165  PSMD6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
102180674  PSMC6; 26S protease regulatory subunit 10B [KO:K03064]
102180902  PSMB8; proteasome subunit beta type-8 [KO:K02740] [EC:3.4.25.1]
102181192  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 isoform X1 [KO:K03039]
102181449  PSMB9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
102181749  PSMB2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
102182039  PSMB1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
102182415  PSMB7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
102183547  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
102183635  PSMD12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
102184096  PSMA4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
102184530  PSME4; proteasome activator complex subunit 4 [KO:K06699]
102185511  PSMD14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
102185667  ADRM1; proteasomal ubiquitin receptor ADRM1 [KO:K06691]
102186449  PSMA5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
102186623  PSMC4; 26S protease regulatory subunit 6B [KO:K03063]
102187178  PSMA8; proteasome subunit alpha type-7-like isoform X1 [KO:K02731] [EC:3.4.25.1]
102187246  PSMC3; 26S protease regulatory subunit 6A [KO:K03065]
102187430  PSMD11; 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
102187906  PSMD1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
102187958  POMP; proteasome maturation protein isoform X1 [KO:K11599]
102188113  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
102189234  PSMB10; proteasome subunit beta type-10 [KO:K02733] [EC:3.4.25.1]
102190150  PSMA1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
102190237  PSMC1; 26S protease regulatory subunit 4 [KO:K03062]
102190848  SHFM1; 26S proteasome complex subunit DSS1 [KO:K10881]
102191015  PSMC2; 26S protease regulatory subunit 7 [KO:K03061]
102191267  PSME3; proteasome activator complex subunit 3 [KO:K06698]
102191527  PSME2; proteasome activator complex subunit 2 isoform X1 [KO:K06697]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
chx04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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