KEGG   PATHWAY: cspg00630
Entry
cspg00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Cytobacillus spongiae
Class
Metabolism; Carbohydrate metabolism
Pathway map
cspg00630  Glyoxylate and dicarboxylate metabolism
cspg00630

Module
cspg_M00012  Glyoxylate cycle [PATH:cspg00630]
cspg_M00621  Glycine cleavage system [PATH:cspg00630]
Other DBs
GO: 0046487 0043648
Organism
Cytobacillus spongiae [GN:cspg]
Gene
LS684_02385  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
LS684_16230  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
LS684_16310  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LS684_10155  malate synthase G [KO:K01638] [EC:2.3.3.9]
LS684_16025  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
LS684_16035  citZ; citrate synthase [KO:K01659] [EC:2.3.3.5]
LS684_10420  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
LS684_22385  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
LS684_09330  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LS684_19475  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LS684_13750  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LS684_09335  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
LS684_13945  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
LS684_13940  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
LS684_14015  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
LS684_14020  methylmalonyl-CoA mutase subunit beta [KO:K01847] [EC:5.4.99.2]
LS684_06835  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
LS684_06830  (Fe-S)-binding protein [KO:K11473] [EC:1.1.99.14]
LS684_17505  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
LS684_06535  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
LS684_20910  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
LS684_08780  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
LS684_19315  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LS684_14310  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
LS684_14305  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
LS684_14315  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
LS684_07345  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LS684_14060  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LS684_17750  gcvH; glycine cleavage system protein GcvH [KO:K02437]
LS684_19670  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
LS684_19665  4Fe-4S dicluster domain-containing protein [KO:K00124]
LS684_19660  cytochrome b/b6 domain-containing protein [KO:K00127]
LS684_13910  cyclase family protein [KO:K07130] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cspg00010  Glycolysis / Gluconeogenesis
cspg00020  Citrate cycle (TCA cycle)
cspg00030  Pentose phosphate pathway
cspg00053  Ascorbate and aldarate metabolism
cspg00071  Fatty acid degradation
cspg00230  Purine metabolism
cspg00250  Alanine, aspartate and glutamate metabolism
cspg00260  Glycine, serine and threonine metabolism
cspg00620  Pyruvate metabolism
cspg00710  Carbon fixation by Calvin cycle
cspg00750  Vitamin B6 metabolism
cspg00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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