KEGG   PATHWAY: dhi00230
Entry
dhi00230                    Pathway                                
Name
Purine metabolism - Dermatobacter hominis
Class
Metabolism; Nucleotide metabolism
Pathway map
dhi00230  Purine metabolism
dhi00230

Module
dhi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:dhi00230]
dhi_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dhi00230]
dhi_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dhi00230]
dhi_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dhi00230]
dhi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dhi00230]
Other DBs
GO: 0006163 0042278
Organism
Dermatobacter hominis [GN:dhi]
Gene
LH044_01655  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
LH044_09200  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
LH044_12140  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
LH044_12200  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
LH044_10635  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
LH044_12155  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
LH044_12170  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
LH044_12165  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
LH044_12135  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
LH044_12195  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
LH044_12190  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
LH044_12175  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
LH044_12180  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
LH044_10630  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
LH044_15800  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
LH044_17755  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
LH044_18810  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
LH044_09270  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
LH044_00235  polyphenol oxidase family protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
LH044_13985  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
LH044_10735  GuaB3 family IMP dehydrogenase-related protein [KO:K00088] [EC:1.1.1.205]
LH044_10760  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
LH044_20605  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
LH044_20265  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
LH044_10730  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
LH044_01365  guanylate kinase [KO:K00942] [EC:2.7.4.8]
LH044_04535  vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
LH044_21610  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
LH044_21615  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
LH044_20665  HD domain-containing protein [KO:K01129] [EC:3.1.5.1]
LH044_01195  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
LH044_05930  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
LH044_09110  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
LH044_03135  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
LH044_16235  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
LH044_12210  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
LH044_10570  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
LH044_18460  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
LH044_10055  amidohydrolase family protein [KO:K01486] [EC:3.5.4.2]
LH044_00960  add; adenosine deaminase [KO:K21053] [EC:3.5.4.2]
LH044_19420  add; adenosine deaminase [KO:K21053] [EC:3.5.4.2]
LH044_10925  adenylate kinase [KO:K00939] [EC:2.7.4.3]
LH044_01075  HIT domain-containing protein [KO:K19710] [EC:2.7.7.53]
LH044_05180  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
LH044_05185  cysN; sulfate adenylyltransferase subunit CysN [KO:K00956] [EC:2.7.7.4]
LH044_05190  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
LH044_07555  FAD-dependent monooxygenase [KO:K16839] [EC:1.14.13.113]
LH044_07560  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
LH044_07565  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K13485] [EC:4.1.1.97]
LH044_07575  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
LH044_07580  alanine--glyoxylate aminotransferase family protein [KO:K00839] [EC:2.6.1.112]
LH044_03230  urease subunit alpha [KO:K01428] [EC:3.5.1.5]
LH044_03225  urease subunit gamma [KO:K14048] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
dhi00030  Pentose phosphate pathway
dhi00220  Arginine biosynthesis
dhi00250  Alanine, aspartate and glutamate metabolism
dhi00260  Glycine, serine and threonine metabolism
dhi00340  Histidine metabolism
dhi00630  Glyoxylate and dicarboxylate metabolism
dhi00730  Thiamine metabolism
dhi00740  Riboflavin metabolism
dhi00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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