KEGG   PATHWAY: ecj00030
Entry
ecj00030                    Pathway                                
Name
Pentose phosphate pathway - Escherichia coli K-12 W3110
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ecj00030  Pentose phosphate pathway
ecj00030

Module
ecj_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ecj00030]
ecj_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ecj00030]
ecj_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ecj00030]
ecj_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ecj00030]
ecj_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ecj00030]
ecj_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ecj00030]
ecj_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ecj00030]
Other DBs
GO: 0006098
Organism
Escherichia coli K-12 W3110 [GN:ecj]
Gene
JW0007  talB; transaldolase B [KO:K00616] [EC:2.2.1.2]
JW0120  gcd; glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
JW0675  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
JW0750  ybhE; 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
JW1198  prsA; phosphoribosylpyrophosphate synthase [KO:K00948] [EC:2.7.6.1]
JW1839  eda; multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase, 2-keto-4-hydroxyglutarate aldolase, and oxaloacetate decarboxylase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
JW1840  edd; 6-phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
JW1841  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
JW2011  gnd; gluconate-6-phosphate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
JW2448  talA; transaldolase A [KO:K00616] [EC:2.2.1.2]
JW2449  tktB; transketolase 2, thiamin-binding [KO:K00615] [EC:2.2.1.1]
JW2892  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
JW2897  yggF; predicted hexoseP phosphatase [KO:K02446] [EC:3.1.3.11]
JW3343  yhfW; predicted mutase [KO:K01839] [EC:5.4.2.7]
JW3349  rpe; D-ribulose-5-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
JW3400  gntK; gluconate kinase 2 [KO:K00851] [EC:2.7.1.12]
JW3731  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
JW3887  pfkA; 6-phosphofructokinase I [KO:K00850] [EC:2.7.1.11]
JW3896  glpX; fructose 1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
JW3985  pgi; glucosephosphate isomerase [KO:K01810] [EC:5.3.1.9]
JW4051  rpiB; ribose 5-phosphate isomerase B/allose 6-phosphate isomerase [KO:K01808] [EC:5.3.1.6]
JW4055  phnN; ribose 1,5-bisphosphokinase [KO:K05774] [EC:2.7.4.23]
JW4191  fbp; fructose-1,6-bisphosphatase I [KO:K03841] [EC:3.1.3.11]
JW4225  idnK; D-gluconate kinase, thermosensitive [KO:K00851] [EC:2.7.1.12]
JW4344  deoC; 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked [KO:K01619] [EC:4.1.2.4]
JW4346  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
JW5280  pfkB; 6-phosphofructokinase II [KO:K16370] [EC:2.7.1.11]
JW5344  fbaB; fructose-bisphosphate aldolase class I [KO:K11645] [EC:4.1.2.13]
JW5475  rpiA; ribosephosphate isomerase, constitutive [KO:K01807] [EC:5.3.1.6]
JW5478  tktA; transketolase 1, thiamin-binding [KO:K00615] [EC:2.2.1.1]
JW5656  tiaE; 2-keto-D-gluconate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
JW5668  kdgK; ketodeoxygluconokinase [KO:K00874] [EC:2.7.1.45]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ecj00010  Glycolysis / Gluconeogenesis
ecj00040  Pentose and glucuronate interconversions
ecj00052  Galactose metabolism
ecj00230  Purine metabolism
ecj00240  Pyrimidine metabolism
ecj00340  Histidine metabolism
ecj00630  Glyoxylate and dicarboxylate metabolism
ecj00750  Vitamin B6 metabolism
KO pathway
ko00030   

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