KEGG   PATHWAY: enf00240
Entry
enf00240                    Pathway                                
Name
Pyrimidine metabolism - Enterobacter sp. FY-07
Class
Metabolism; Nucleotide metabolism
Pathway map
enf00240  Pyrimidine metabolism
enf00240

Module
enf_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:enf00240]
enf_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:enf00240]
enf_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:enf00240]
enf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:enf00240]
enf_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:enf00240]
enf_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:enf00240]
Other DBs
GO: 0006220 0006213
Organism
Enterobacter sp. FY-07 [GN:enf]
Gene
AKI40_4238  carB; Carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
AKI40_4239  carA; Carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
AKI40_4447  aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
AKI40_4448  pyrI; Aspartate carbamoyltransferase regulatory chain [KO:K00610]
AKI40_4461  putative amidohydrolase [KO:K01465] [EC:3.5.2.3]
AKI40_2581  Dihydroorotase [KO:K01465] [EC:3.5.2.3]
AKI40_2425  pyrD; dihydroorotate dehydrogenase 2 [KO:K00254] [EC:1.3.5.2]
AKI40_0108  pyrE; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
AKI40_3310  Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
AKI40_4119  pyrH; UMP kinase, putative [KO:K09903] [EC:2.7.4.22]
AKI40_1343  ndk; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
AKI40_4052  mazG; MazG family protein [KO:K04765] [EC:3.6.1.9]
AKI40_0538  Maf-like protein yceF 2 [KO:K06287] [EC:3.6.1.-]
AKI40_0662  putative metal dependent hydrolase [KO:K07043] [EC:3.6.1.-]
AKI40_4051  CTP synthase [KO:K01937] [EC:6.3.4.2]
AKI40_2395  cmk; Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
AKI40_2720  NUDIX hydrolase [KO:K08320] [EC:3.6.1.65]
AKI40_1720  Uridine kinase [KO:K00876] [EC:2.7.1.48]
AKI40_1460  ushA; UshA protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
AKI40_4589  5'-Nucleotidase domain protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
AKI40_3829  ushA; UshA protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
AKI40_1675  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
AKI40_0968  surE; Stationary phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
AKI40_2145  nagD; HAD-superfamily hydrolase, subfamily IIA [KO:K02566] [EC:3.1.3.5]
AKI40_4297  enzyme with a phosphatase-like domain, HAD-superfamily hydrolase domain [KO:K08723] [EC:3.1.3.-]
AKI40_4762  Uridine phosphorylase, putative [KO:K00757] [EC:2.4.2.3]
AKI40_3949  UPF0345 protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
AKI40_4489  cpdB; bifunctional 2'''',3''''-cyclic nucleotide 2''''-phosphodiesterase/3''''-nucleotidase periplasmic precursor protein [KO:K01119] [EC:3.1.4.16 3.1.3.6]
AKI40_4243  rihC; Non-specific ribonucleoside hydrolase rihC [KO:K12700] [EC:3.2.2.-]
AKI40_4065  Lysine decarboxylase family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
AKI40_1670  cdd; Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
AKI40_0422  codA; Cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
AKI40_4455  Anaerobic ribonucleoside-triphosphate reductase, putative [KO:K21636] [EC:1.1.98.6]
AKI40_1722  Deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
AKI40_1607  Ribonucleoside-diphosphate reductase 1 subunit alpha [KO:K00525] [EC:1.17.4.1]
AKI40_1102  Ribonucleoside-diphosphate reductase 2 subunit alpha [KO:K00525] [EC:1.17.4.1]
AKI40_1101  nrdF; Ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like [KO:K00526] [EC:1.17.4.1]
AKI40_1606  nrdB; Ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [KO:K00526] [EC:1.17.4.1]
AKI40_1570  5'-nucleotidase YfbR [KO:K08722] [EC:3.1.3.89]
AKI40_1170  Hypothetical protein [KO:K06952] [EC:3.1.3.89]
AKI40_2619  tmk; Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
AKI40_0111  dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut [KO:K01520] [EC:3.6.1.23]
AKI40_4287  Thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
AKI40_3352  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
AKI40_0937  Thymidylate synthase [KO:K00560] [EC:2.1.1.45]
AKI40_3724  gltD; NADPH-dependent glutamate synthase small chain protein [KO:K17722] [EC:1.3.1.1]
AKI40_3725  Dihydroorotate dehydrogenase family protein [KO:K17723] [EC:1.3.1.1]
AKI40_3726  D-hydantoinase [KO:K01464] [EC:3.5.2.2]
AKI40_3727  Amidase, hydantoinase/carbamoylase family [KO:K06016] [EC:3.5.1.6 3.5.1.87]
AKI40_2539  rutA; Luciferase monooxygenase family protein [KO:K09018] [EC:1.14.99.46]
AKI40_2533  rutF; Pyrimidine utilization flavin reductase protein F [KO:K09024] [EC:1.5.1.-]
AKI40_2537  Hypothetical protein [KO:K09020] [EC:3.5.1.110]
AKI40_2536  Endoribonuclease L-PSP family protein [KO:K09021]
AKI40_2535  Alpha/beta hydrolase fold [KO:K09023] [EC:3.5.1.-]
AKI40_2982  oxidoreductase, short chain dehydrogenase/reductase family, putative [KO:K16066] [EC:1.1.1.381 1.1.1.-]
AKI40_2534  NADH dehydrogenase/NADH nitroreductase [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
enf00030  Pentose phosphate pathway
enf00220  Arginine biosynthesis
enf00250  Alanine, aspartate and glutamate metabolism
enf00280  Valine, leucine and isoleucine degradation
enf00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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