KEGG   PATHWAY: gss00230
Entry
gss00230                    Pathway                                
Name
Purine metabolism - Gallibacterium salpingitidis
Class
Metabolism; Nucleotide metabolism
Pathway map
gss00230  Purine metabolism
gss00230

Module
gss_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:gss00230]
gss_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gss00230]
gss_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gss00230]
gss_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gss00230]
gss_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gss00230]
Other DBs
GO: 0006163 0042278
Organism
Gallibacterium salpingitidis [GN:gss]
Gene
NYR30_01095  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
NYR30_01230  apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH [KO:K01525] [EC:3.6.1.41]
NYR30_01385  [KO:K01487] [EC:3.5.4.3]
NYR30_01910  deoB; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
NYR30_01915  deoD; purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
NYR30_02200  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
NYR30_02220  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
NYR30_02225  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
NYR30_02605  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
NYR30_02665  [KO:K01923] [EC:6.3.2.6]
NYR30_02780  purA; adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
NYR30_02795  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
NYR30_03085  gpt; xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
NYR30_03340  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
NYR30_03345  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
NYR30_03895  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
NYR30_04625  [KO:K01524] [EC:3.6.1.11 3.6.1.40]
NYR30_04810  [KO:K05851] [EC:4.6.1.1]
NYR30_04880  purK; 5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
NYR30_04885  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
NYR30_05165  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
NYR30_05170  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
NYR30_05445  ppnN; nucleotide 5'-monophosphate nucleosidase PpnN [KO:K06966] [EC:3.2.2.10 3.2.2.-]
NYR30_05840  [KO:K01129] [EC:3.1.5.1]
NYR30_05975  [KO:K00948] [EC:2.7.6.1]
NYR30_06005  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
NYR30_06535  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
NYR30_06935  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
NYR30_06950  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
NYR30_08645  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
NYR30_08715  [KO:K01119] [EC:3.1.4.16 3.1.3.6]
NYR30_10330  cpdA; 3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
NYR30_10335  nudF; ADP-ribose diphosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
NYR30_10505  spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
NYR30_10515  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
NYR30_10830  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
NYR30_11035  ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA [KO:K11751] [EC:3.1.3.5 3.6.1.45]
NYR30_11330  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
NYR30_11640  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
NYR30_12395  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
NYR30_12540  [KO:K00956] [EC:2.7.7.4]
NYR30_12545  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
NYR30_12670  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
NYR30_12890  [KO:K01519] [EC:3.6.1.66]
NYR30_13370  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
NYR30_13430  relA; GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
gss00030  Pentose phosphate pathway
gss00220  Arginine biosynthesis
gss00250  Alanine, aspartate and glutamate metabolism
gss00260  Glycine, serine and threonine metabolism
gss00340  Histidine metabolism
gss00630  Glyoxylate and dicarboxylate metabolism
gss00730  Thiamine metabolism
gss00740  Riboflavin metabolism
gss00790  Folate biosynthesis
KO pathway
ko00230   

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