KEGG   PATHWAY: har00230
Entry
har00230                    Pathway                                
Name
Purine metabolism - Herminiimonas arsenicoxydans
Class
Metabolism; Nucleotide metabolism
Pathway map
har00230  Purine metabolism
har00230

Module
har_M00005  PRPP biosynthesis, ribose-5P => PRPP [PATH:har00230]
har_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:har00230]
har_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:har00230]
har_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:har00230]
har_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:har00230]
Other DBs
GO: 0006163 0042278
Organism
Herminiimonas arsenicoxydans [GN:har]
Gene
HEAR0255  purH; Bifunctional purine biosynthesis protein purH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase); IMP cyclohydrolase (Inosinicase) (IMP synthetase) (ATIC)] [KO:K00602] [EC:2.1.2.3 3.5.4.10]
HEAR0312  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
HEAR0560  purD; phosphoribosylglycinamide synthetase (GAR synthetase) (Phosphoribosylamine--glycine ligase) (Glycinamide ribonucleotide synthetase) [KO:K01945] [EC:6.3.4.13]
HEAR0602  [KO:K07127] [EC:3.5.2.17]
HEAR0649  [KO:K01081] [EC:3.1.3.5]
HEAR0870  [KO:K09913] [EC:2.4.2.1 2.4.2.2]
HEAR1096  [KO:K01524] [EC:3.6.1.11 3.6.1.40]
HEAR1229  purF; Amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) [KO:K00764] [EC:2.4.2.14]
HEAR1254  surE; 5'-nucleotidase SurE (Nucleoside 5'-monophosphate phosphohydrolase) [KO:K03787] [EC:3.1.3.5 3.1.3.6]
HEAR1260  ndk; nucleoside diphosphate kinase (NDK) (NDP kinase) (Nucleoside-2-P kinase) [KO:K00940] [EC:2.7.4.6]
HEAR1275  purA; adenylosuccinate synthetase (IMP--aspartate ligase) (AdSS) (AMPSase) [KO:K01939] [EC:6.3.4.4]
HEAR1359  guaB; Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) [KO:K00088] [EC:1.1.1.205]
HEAR1361  guaA; GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase) [KO:K01951] [EC:6.3.5.2]
HEAR1388  purT; Phosphoribosylglycinamide formyltransferase 2 (GART 2) (GAR transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (Formate-dependent GAR transformylase) [KO:K08289] [EC:6.3.1.21]
HEAR1476  [KO:K01081] [EC:3.1.3.5]
HEAR1672  nrdD; anaerobic class III ribonucleotide reductase NrdD [KO:K21636] [EC:1.1.98.6]
HEAR1695  [KO:K06966] [EC:3.2.2.10 3.2.2.-]
HEAR1740  purL; phosphoribosylformyl-glycineamide synthetase (FGAM synthetase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) [KO:K01952] [EC:6.3.5.3]
HEAR1802  relA; GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
HEAR1811  [KO:K01515] [EC:3.6.1.13 3.6.1.-]
HEAR1925  [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
HEAR2125  [KO:K01519] [EC:3.6.1.66]
HEAR2130  gmk; guanylate kinase (GMP kinase) [KO:K00942] [EC:2.7.4.8]
HEAR2132  spoT; Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) [KO:K01139] [EC:2.7.6.5 3.1.7.2]
HEAR2395  cysD; Sulfate adenylyltransferase subunit 2 (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase small subunit) [KO:K00957] [EC:2.7.7.4]
HEAR2396  cysN; Sulfate adenylyltransferase subunit 1 (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase large subunit) [KO:K00956] [EC:2.7.7.4]
HEAR2460  [KO:K22602] [EC:3.5.1.126]
HEAR2475  purN; Phosphoribosylglycinamide formyltransferase (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) [KO:K11175] [EC:2.1.2.2]
HEAR2487  adk; Adenylate kinase (ATP-AMP transphosphorylase) [KO:K00939] [EC:2.7.4.3]
HEAR2601  guaC; GMP reductase (Guanosine 5'-monophosphate oxidoreductase) (Guanosine monophosphate reductase) [KO:K00364] [EC:1.7.1.7]
HEAR2606  purK; Phosphoribosylaminoimidazole carboxylase ATPase subunit (AIR carboxylase) (AIRC) [KO:K01589] [EC:6.3.4.18]
HEAR2607  purE; Phosphoribosylaminoimidazole carboxylase catalytic subunit (AIR carboxylase) (AIRC) [KO:K01588] [EC:5.4.99.18]
HEAR2608  purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) [KO:K01923] [EC:6.3.2.6]
HEAR2634  purM; Phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) [KO:K01933] [EC:6.3.3.1]
HEAR2674  [KO:K22602] [EC:3.5.1.126]
HEAR2721  [KO:K15778] [EC:5.4.2.8 5.4.2.2]
HEAR2734  apaH; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase) [KO:K01525] [EC:3.6.1.41]
HEAR2766  pkfB; Carbohydrate kinase [KO:K00856] [EC:2.7.1.20]
HEAR2769  nrdB; Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide reductase small subunit) [KO:K00526] [EC:1.17.4.1]
HEAR2770  nrdA; Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide reductase) [KO:K00525] [EC:1.17.4.1]
HEAR2893  prs; Ribose-phosphate pyrophosphokinase (RPPK) (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) [KO:K00948] [EC:2.7.6.1]
HEAR3119  [KO:K01129] [EC:3.1.5.1]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
har00030  Pentose phosphate pathway
har00220  Arginine biosynthesis
har00250  Alanine, aspartate and glutamate metabolism
har00260  Glycine, serine and threonine metabolism
har00340  Histidine metabolism
har00630  Glyoxylate and dicarboxylate metabolism
har00730  Thiamine metabolism
har00740  Riboflavin metabolism
har00790  Folate biosynthesis
KO pathway
ko00230   

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