KEGG   Homo sapiens (human): 84108
Entry
84108             CDS       T01001                                 
Symbol
PCGF6, MBLR, RNF134
Name
(RefSeq) polycomb group ring finger 6
  KO
K11470  polycomb group RING finger protein 6
Organism
hsa  Homo sapiens (human)
Pathway
hsa03083  Polycomb repressive complex
hsa04550  Signaling pathways regulating pluripotency of stem cells
Network
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    84108 (PCGF6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    84108 (PCGF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    84108 (PCGF6)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     84108 (PCGF6)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 RAWUL zf-RING_2 zf-RING_UBOX zf-RING_5 zf-RING_6 zf-RING_10 TRAF3_RING BUD22 zf-C3HC4_4 RING_XB3-XBAT31 zf-rbx1
Other DBs
NCBI-GeneID: 84108
NCBI-ProteinID: NP_001011663
OMIM: 607816
HGNC: 21156
Ensembl: ENSG00000156374
UniProt: Q9BYE7
Structure
LinkDB
Position
10:complement(103302796..103351140)
AA seq 350 aa
MEGVAVVTAGSVGAAKTEGAAALPPPPPVSPPALTPAPAAGEEGPAPLSETGAPGCSGSR
PPELEPERSLGRFRGRFEDEDEELEEEEELEEEEEEEEEDMSHFSLRLEGGRQDSEDEEE
RLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQ
PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERGLEVPKPAVPQPVPSSKGRSKKV
LESVFRIPPELDMSLLLEFIGANEGTGHFKPLEKKFVRVSGEATIGHVEKFLRRKMGLDP
ACQVDIICGDHLLEQYQTLREIRRAIGDAAMQDGLLVLHYGLVVSPLKIT
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggagggggtcgcggtggtgacggcgggcagcgtaggcgctgccaaaaccgagggagct
gcagccttgccgcctccgcctcctgtctccccgcccgccctcacccctgcacccgcagcg
ggtgaggagggaccggcgcctctgtctgagacgggggctcccggctgctccggctcccgg
ccccctgagctggagccggagcgcagcctgggccgcttcagaggccgcttcgaggacgag
gacgaggagttggaagaagaagaggagctggaggaggaagaagaggaggaggaggaggac
atgagtcacttctcgttgaggctggagggaggccggcaggactcggaggacgaggaggag
cgcctgattaatctctctgagctgaccccatacatcttgtgttccatttgcaaaggttac
ttaatagatgcaactaccatcacagaatgtcttcataccttttgtaaaagctgcatcgta
agacatttttactacagcaacagatgtccaaaatgcaatatagtagtacatcagacacaa
cctctttataacataaggttggaccgacagttacaagacatagtgtacaaattagtgatc
aatctagaggaaagagaaaaaaagcaaatgcatgatttctataaagaaagaggtctagaa
gtacctaaacctgctgttccacagccagtcccttcaagcaaaggaagatctaaaaaagtc
ctagaatcagtgtttcgtattccacctgaacttgatatgtctttattactggagttcatt
ggtgctaatgaaggcacgggacattttaagccattggaaaagaagtttgttcgagtttca
ggagaagcaactattggacatgtagaaaaattcctcagaagaaaaatgggtcttgatcca
gcttgtcaggtagatataatctgtggtgatcacctgttggagcagtatcaaactctaagg
gaaatccgacgtgcaataggtgatgcagcaatgcaggatggtctgcttgtccttcattat
ggtcttgtggtttctcctctgaagataacttga

KEGG   Homo sapiens (human): 6015
Entry
6015              CDS       T01001                                 
Symbol
RING1, RING1A, RNF1
Name
(RefSeq) ring finger protein 1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03083  Polycomb repressive complex
Network
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N01577  Gene silencing by methylation of H3K27 and ubiquitination of H2AK119
N01585  Deubiquitination of H2AK119
N01586  Activation of PRC2.2 by ubiquitination of H2AK119
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
N01620  Blocking ubiquitination of H2AK119 by CK2
N01701  Transcriptional activation by acetylation of H3K27
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    6015 (RING1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    6015 (RING1)
   03036 Chromosome and associated proteins [BR:hsa03036]
    6015 (RING1)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     6015 (RING1)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    6015 (RING1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     6015 (RING1)
    Noncanonical PRC1 (PRC1.1)
     6015 (RING1)
    Noncanonical PRC1 (PRC1.3/1.5)
     6015 (RING1)
    Noncanonical PRC1 (PRC1.6)
     6015 (RING1)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-Nse zf-C3HC4_4 zf-RING_6 zf-RING_4 zf-RING_5 RING_XB3-XBAT31 zf-rbx1 zf-UDP TRAF3_RING zf-C3HC4_5 Sina_RING zf-ANAPC11
Other DBs
NCBI-GeneID: 6015
NCBI-ProteinID: NP_002922
OMIM: 602045
HGNC: 10018
Ensembl: ENSG00000204227
UniProt: Q06587 A0A1U9X8F2
LinkDB
Position
6:33208500..33212716
AA seq 406 aa
MTTPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAH
QDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIPGSDQTTTMSGGEGEPGEGE
GDGEDVSSDSAPDSAPGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLG
GGTLGPPSPPGAPSPPEPGGEIELVFRPHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLA
LRIALERRQQQEAGEPGGPGGGASDTGGPDGCGGEGGGAGGGDGPEEPALPSLEGVSEKQ
YTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTKDPK
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgacgacgccggcgaatgcccagaatgccagcaaaacgtgggaactgagtctgtatgag
ctgcaccggaccccgcaggaagccataatggatggcacagagattgctgtttcccctcgg
tcactgcattcagaactcatgtgccctatctgcctggacatgctgaagaatacgatgacc
accaaggagtgcctccacagattctgctctgactgcattgtcacagccctacggagcggg
aacaaggagtgtcctacctgccgaaagaagctggtgtccaagcgatccctacggccagac
cccaactttgatgccctgatctctaagatctatcctagccgggaggaatacgaggcccat
caagaccgagtgcttatccgcctgagccgcctgcacaaccagcaggcattgagctccagc
attgaggaggggctacgcatgcaggccatgcacagggcccagcgtgtgaggcggccgata
ccagggtcagatcagaccacaacgatgagtgggggggaaggagagcccggggagggagaa
ggggatggagaagatgtgagctcagactccgcccctgactctgccccaggccctgctccc
aagcgaccccgtggagggggcgcaggggggagcagtgtagggacagggggaggcggcact
ggtggggtgggtgggggtgccggttcggaagactctggtgaccggggagggactctggga
gggggaacgctgggccccccaagccctcctggggcccccagccccccagagccaggtgga
gaaattgagctcgtgttccggccccaccccctgctcgtggagaagggagaatactgccag
acgaggtatgtgaagacaactgggaatgccacagtggaccacctctccaagtacttggcc
ctgcgcattgccctcgagcggaggcaacagcaggaagcaggggagccaggagggcctgga
gggggcgcctctgacaccggaggacctgatgggtgtggcggggagggtgggggtgccgga
ggaggtgacggtcctgaggagcctgctttgcccagcctggagggcgtcagtgaaaagcag
tacaccatctacatcgcacctggaggcggggcgttcacgacgttgaatggctcgctgacc
ctggagctggtgaatgagaaattctggaaggtgtcccggccactggagctgtgctatgct
cccaccaaggatccaaagtga

KEGG   Homo sapiens (human): 6045
Entry
6045              CDS       T01001                                 
Symbol
RNF2, BAP-1, BAP1, DING, HIPI3, LUSYAM, RING1B, RING2
Name
(RefSeq) ring finger protein 2
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03083  Polycomb repressive complex
Network
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N01577  Gene silencing by methylation of H3K27 and ubiquitination of H2AK119
N01585  Deubiquitination of H2AK119
N01586  Activation of PRC2.2 by ubiquitination of H2AK119
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
N01620  Blocking ubiquitination of H2AK119 by CK2
N01701  Transcriptional activation by acetylation of H3K27
Disease
H02587  Luo-Schoch-Yamamoto syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    6045 (RNF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    6045 (RNF2)
   03036 Chromosome and associated proteins [BR:hsa03036]
    6045 (RNF2)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     6045 (RNF2)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    6045 (RNF2)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     6045 (RNF2)
    Noncanonical PRC1 (PRC1.1)
     6045 (RNF2)
    Noncanonical PRC1 (PRC1.3/1.5)
     6045 (RNF2)
    Noncanonical PRC1 (PRC1.6)
     6045 (RNF2)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 RING_XB3-XBAT31 zf-Nse zf-RING_5 zf-RING_4 zf-rbx1 zf-RING_6 zf-UDP TRAF3_RING zf-C3HC4_5 zf-ANAPC11
Other DBs
NCBI-GeneID: 6045
NCBI-ProteinID: NP_009143
OMIM: 608985
HGNC: 10061
Ensembl: ENSG00000121481
UniProt: Q99496
Structure
LinkDB
Position
1:185045558..185102603
AA seq 336 aa
MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKN
TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY
EAHQERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCS
NASTHSNQEAGPSNKRTKTSDDSGLELDNNNAAMAIDPVMDGASEIELVFRPHPTLMEKD
DSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASG
QFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgtctcaggctgtgcagacaaacggaactcaaccattaagcaaaacatgggaactcagt
ttatatgagttacaacgaacacctcaggaggcaataacagatggcttagaaattgtggtt
tcacctcgaagtctacacagtgaattaatgtgcccaatttgtttggatatgttgaagaac
accatgactacaaaggagtgtttacatcgtttttgtgcagactgcatcatcacagccctt
agaagtggcaacaaagaatgtcctacctgtcggaaaaaactagtttccaaaagatcacta
aggccagacccaaactttgatgcactcatcagcaaaatttatccaagtcgtgatgagtat
gaagctcatcaagagagagtattagccaggatcaacaagcacaataatcagcaagcactc
agtcacagcattgaggaaggactgaagatacaggccatgaacagactgcagcgaggcaag
aaacaacagattgaaaatggtagtggagcagaagataatggtgacagttcacactgcagt
aatgcatccacacatagcaatcaggaagcaggccctagtaacaaacggaccaaaacatct
gatgattctgggctagagcttgataataacaatgcagcaatggcaattgatccagtaatg
gatggtgctagtgaaattgaattagtattcaggcctcatcccacacttatggaaaaagat
gacagtgcacagacgagatacataaagacttctggtaacgccactgttgatcacttatcc
aagtatctggctgtgaggttagctttagaagaacttcgaagcaaaggtgaatcaaaccag
atgaaccttgatacagccagtgagaagcagtataccatttatatagcaacagccagtggc
cagttcactgtattaaatggctctttttctttggaattggtcagtgagaaatactggaaa
gtgaacaaacccatggaactttattacgcacctacaaaggagcacaaatga

KEGG   Homo sapiens (human): 23429
Entry
23429             CDS       T01001                                 
Symbol
RYBP, AAP1, APAP-1, DEDAF, YEAF1
Name
(RefSeq) RING1 and YY1 binding protein
  KO
K11469  RING1 and YY1-binding protein
Organism
hsa  Homo sapiens (human)
Pathway
hsa03083  Polycomb repressive complex
Network
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N01586  Activation of PRC2.2 by ubiquitination of H2AK119
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
N01620  Blocking ubiquitination of H2AK119 by CK2
N01701  Transcriptional activation by acetylation of H3K27
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    23429 (RYBP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    23429 (RYBP)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     23429 (RYBP)
    Noncanonical PRC1 (PRC1.3/1.5)
     23429 (RYBP)
    Noncanonical PRC1 (PRC1.6)
     23429 (RYBP)
SSDB
Motif
Pfam: YAF2_RYBP Zn_ribbon_RanBP
Other DBs
NCBI-GeneID: 23429
NCBI-ProteinID: NP_036366
OMIM: 607535
HGNC: 10480
Ensembl: ENSG00000163602
UniProt: Q8N488
Structure
LinkDB
Position
3:complement(72374597..72446623)
AA seq 228 aa
MTMGDKKSPTRPKRQAKPAADEGFWDCSVCTFRNSAEAFKCSICDVRKGTSTRKPRINSQ
LVAQQVAQQYATPPPPKKEKKEKVEKQDKEKPEKDKEISPSVTKKNTNKKTKPKSDILKD
PPSEANSIQSANATTKTSETNHTSRPRLKNVDRSTAQQLAVTVGNVTVIITDFKEKTRSS
STSSSTVTSSAGSEQQNQSSSGSESTDKGSSRSSTPKGDMSAVNDESF
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaccatgggcgacaagaagagcccgaccaggccaaaaagacaagcgaaacctgccgca
gacgaagggttttgggattgtagcgtctgcaccttcagaaacagtgctgaagcctttaaa
tgcagcatctgcgatgtgaggaaaggcacctccaccagaaaacctcggatcaattctcag
ctggtggcacaacaagtggcacaacagtatgccaccccaccaccccctaaaaaggagaag
aaggagaaagttgaaaagcaggacaaagagaaacctgagaaagacaaggaaattagtcct
agtgttaccaagaaaaataccaacaagaaaaccaaaccaaagtctgacattctgaaagat
cctcctagtgaagcaaacagcatacagtctgcaaatgctacaacaaagaccagcgaaaca
aatcacacctcaaggccccggctgaaaaacgtggacaggagcactgcacagcagttggca
gtaactgtgggcaacgtcaccgtcattatcacagactttaaggaaaagactcgctcctca
tcgacatcctcatccacagtgacctccagtgcagggtcagaacagcagaaccagagcagc
tcggggtcagagagcacagacaagggctcctcccgttcctccacgccaaagggcgacatg
tcagcagtcaatgatgaatctttctga

KEGG   Homo sapiens (human): 10138
Entry
10138             CDS       T01001                                 
Symbol
YAF2
Name
(RefSeq) YY1 associated factor 2
  KO
K11468  YY1-associated factor 2
Organism
hsa  Homo sapiens (human)
Pathway
hsa03083  Polycomb repressive complex
Network
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N01586  Activation of PRC2.2 by ubiquitination of H2AK119
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
N01620  Blocking ubiquitination of H2AK119 by CK2
N01701  Transcriptional activation by acetylation of H3K27
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    10138 (YAF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    10138 (YAF2)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     10138 (YAF2)
    Noncanonical PRC1 (PRC1.3/1.5)
     10138 (YAF2)
    Noncanonical PRC1 (PRC1.6)
     10138 (YAF2)
SSDB
Motif
Pfam: YAF2_RYBP Zn_ribbon_RanBP PROCN
Other DBs
NCBI-GeneID: 10138
NCBI-ProteinID: NP_005739
OMIM: 607534
HGNC: 17363
Ensembl: ENSG00000015153
UniProt: Q8IY57
Structure
LinkDB
Position
12:complement(42157104..42238248)
AA seq 180 aa
MGDKKSPTRPKRQPKPSSDEGYWDCSVCTFRNSAEAFKCMMCDVRKGTSTRKPRPVSQLV
AQQVTQQFVPPTQSKKEKKDKVEKEKSEKETTSKKNSHKKTRPRLKNVDRSSAQHLEVTV
GDLTVIITDFKEKTKSPPASSAASADQHSQSGSSSDNTERGMSRSSSPRGEASSLNGESH
NT seq 543 nt   +upstreamnt  +downstreamnt
atgggagacaagaagagccccaccaggccgaagcggcagccgaagccgtcctcggatgag
ggttactgggactgtagcgtctgcaccttccggaacagcgccgaggccttcaagtgcatg
atgtgcgatgtgcggaagggcacctccacccggaaacctcgacctgtctcccagttggtt
gcacagcaggttactcagcagtttgtgcctcctacacagtcaaagaaagagaaaaaagat
aaagtagaaaaagaaaaaagtgaaaaggaaacaactagcaaaaagaatagccataagaaa
accaggccaagattgaaaaatgtggatcggagtagtgctcagcatttggaagttactgtt
ggagatctgacagtcattattacagactttaaggagaaaacaaagtcaccgcctgcatct
agtgctgcttctgcagatcaacacagtcaaagcggctctagctctgataacacagagaga
ggaatgtccaggtcatcttcacccagaggagaagcctcatcattgaatggagaatctcat
taa

KEGG   Homo sapiens (human): 11091
Entry
11091             CDS       T01001                                 
Symbol
WDR5, BIG-3, BIG3, CFAP89, SWD3
Name
(RefSeq) WD repeat domain 5
  KO
K14963  COMPASS component SWD3
Organism
hsa  Homo sapiens (human)
Pathway
hsa03083  Polycomb repressive complex
hsa04934  Cushing syndrome
Network
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    11091 (WDR5)
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    11091 (WDR5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    11091 (WDR5)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     11091 (WDR5)
    NSL complex
     11091 (WDR5)
   HMT complexes
    COMPASS/SET1 complex
     11091 (WDR5)
    COMPASS/SET1 complex (yeast)
     11091 (WDR5)
    MLL-HCF complex
     11091 (WDR5)
    MLL3/MLL4 complex
     11091 (WDR5)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     11091 (WDR5)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 eIF2A Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_HPS5 WD40_like Beta-prop_NUP159_NUP214 RMC1_N Beta-prop_WDR75_2nd PROPPIN Ge1_WD40 Beta-prop_VPS8 Beta-prop_Vps41 VPS8_N WDR54 Beta-prop_LRRK2 Beta-prop_WDR11_1st VID27 Mala_s_1-like CDtoxinA Nucleoporin_N
Other DBs
NCBI-GeneID: 11091
NCBI-ProteinID: NP_060058
OMIM: 609012
HGNC: 12757
Ensembl: ENSG00000196363
UniProt: P61964
Structure
LinkDB
Position
9:134135199..134159968
AA seq 334 aa
MATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL
ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK
CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN
RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL
WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH
TDVVISTACHPTENIIASAALENDKTIKLWKSDC
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggcgacggaggagaagaagcccgagaccgaggccgccagagcacagccaaccccttcg
tcatccgccactcagagcaagcctacacctgtgaagccaaactatgctctaaagttcacc
cttgctggccacaccaaagcagtgtcctccgtgaaattcagcccgaatggagagtggctg
gcaagttcatctgctgataaacttattaaaatttggggcgcgtatgatgggaaatttgag
aaaaccatatctggtcacaagctgggaatatccgatgtagcctggtcgtcagattctaac
cttcttgtttctgcctcagatgacaaaaccttgaagatatgggacgtgagctcgggcaag
tgtctgaaaaccctgaagggacacagtaattatgtcttttgctgcaacttcaatccccag
tccaaccttattgtctcaggatcctttgacgaaagcgtgaggatatgggatgtgaaaaca
gggaagtgcctcaagactttgccagctcactcggatccagtctcggccgttcattttaat
cgtgatggatccttgatagtttcaagtagctatgatggtctctgtcgcatctgggacacc
gcctcaggccagtgcctgaagacgctcatcgatgacgacaacccccccgtgtcttttgtg
aagttctccccgaacggcaaatacatcctggccgccacgctggacaacactctgaagctc
tgggactacagcaaggggaagtgcctgaagacgtacactggccacaagaatgagaaatac
tgcatatttgccaatttctctgttactggtgggaagtggattgtgtctggctcagaggat
aaccttgtttacatctggaaccttcagacgaaagagattgtacagaaactacaaggccac
acagatgtcgtgatctcaacagcttgtcacccaacagaaaacatcatcgcctctgctgcg
ctagaaaatgacaaaacaattaaactgtggaagagtgactgctaa

KEGG   Homo sapiens (human): 11335
Entry
11335             CDS       T01001                                 
Symbol
CBX3, HECH, HP1-GAMMA, HP1Hs-gamma, HP1gamma
Name
(RefSeq) chromobox 3
  KO
K11586  chromobox protein 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa03083  Polycomb repressive complex
hsa05131  Shigellosis
Network
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    11335 (CBX3)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05131 Shigellosis
    11335 (CBX3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    11335 (CBX3)
   03036 Chromosome and associated proteins [BR:hsa03036]
    11335 (CBX3)
Spliceosome [BR:hsa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    11335 (CBX3)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     11335 (CBX3)
  Heterochromatin formation proteins
   HP1 (heterochromatin protein 1)
    11335 (CBX3)
SSDB
Motif
Pfam: Chromo_shadow Chromo Mtf2_C
Other DBs
NCBI-GeneID: 11335
NCBI-ProteinID: NP_009207
OMIM: 604477
HGNC: 1553
Ensembl: ENSG00000122565
UniProt: Q13185 A4D177
Structure
LinkDB
Position
7:26201443..26213607
AA seq 183 aa
MASNKTTLQKMGKKQNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNT
WEPEENLDCPELIEAFLNSQKAGKEKDGTKRKSLSDSESDDSKSKKKRDAADKPRGFARG
LDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCPED
EAQ
NT seq 552 nt   +upstreamnt  +downstreamnt
atggcctccaacaaaactacattgcaaaaaatgggaaaaaaacagaatggaaagagtaaa
aaagttgaagaggcagagcctgaagaatttgtcgtggaaaaagtactagatcgacgtgta
gtgaatgggaaagtggaatatttcctgaagtggaagggatttacagatgctgacaatact
tgggaacctgaagaaaatttagattgtccagaattgattgaagcgtttcttaactctcag
aaagctggcaaagaaaaagatggtacaaaaagaaaatctttatctgacagtgaatctgat
gacagcaaatcaaagaagaaaagagatgctgctgacaaaccaagaggatttgccagaggt
cttgatcctgaaagaataattggtgccacagacagcagtggagaattgatgtttctcatg
aaatggaaagattcagatgaggcagacttggtgctggcgaaagaggcaaatatgaagtgt
cctcaaattgtaattgctttttatgaagagagactaacttggcattcttgtccagaagat
gaagctcaataa

KEGG   Homo sapiens (human): 7027
Entry
7027              CDS       T01001                                 
Symbol
TFDP1, DILC, DP1, DRTF1, Dp-1
Name
(RefSeq) transcription factor Dp-1
  KO
K04683  transcription factor Dp-1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03083  Polycomb repressive complex
hsa04110  Cell cycle
hsa04350  TGF-beta signaling pathway
Network
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    7027 (TFDP1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    7027 (TFDP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    7027 (TFDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    7027 (TFDP1)
   03036 Chromosome and associated proteins [BR:hsa03036]
    7027 (TFDP1)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix cell cycle-controlling factors, DP
    7027 (TFDP1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     7027 (TFDP1)
SSDB
Motif
Pfam: DP E2F_TDP YcbB
Other DBs
NCBI-GeneID: 7027
NCBI-ProteinID: NP_009042
OMIM: 189902
HGNC: 11749
Ensembl: ENSG00000198176
UniProt: Q14186
Structure
LinkDB
Position
13:113584688..113641473
AA seq 410 aa
MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggcaaaagatgccggtctaattgaagccaacggagaactcaaggtcttcatagaccag
aaccttagtcccgggaaaggcgtggtgtccctcgtggccgttcacccctccaccgtcaac
ccgctcgggaagcagctcttgccaaaaacctttggacagtccaatgtcaacattgcccag
caagtggtaattggtacgcctcagagaccggcagcgtcaaacaccctggtggtaggaagc
ccacacacccccagcactcactttgcctctcagaaccagccttccgactcctcaccttgg
tctgccgggaagcgcaacaggaaaggagagaagaatggcaagggcctacggcatttctcc
atgaaggtctgcgagaaggtgcagaggaaagggaccacttcctacaacgaagtggcagac
gagctggttgcggagttcagtgctgccgacaaccacatcttaccaaacgagtcagcttat
gaccagaaaaacataagacggcgcgtctacgatgccttaaacgtgctaatggccatgaac
atcatctccaaggagaagaaggagatcaagtggattggtctgcccaccaactcggctcag
gaatgtcagaacttagaggtggaaagacagaggagacttgaaagaataaaacagaaacag
tctcaacttcaagaacttattctacagcaaattgccttcaagaacctggtgcagagaaac
cggcatgcggagcagcaggccagccggccaccgccacccaactcagtcatccacctgccc
ttcatcatcgtcaacaccagcaagaagacggtcatcgactgcagcatctccaatgacaaa
tttgagtatctgtttaattttgacaacacatttgaaatccacgatgacatagaagtgctg
aagcggatgggcatggcttgcgggctggagtcggggagctgctctgccgaagaccttaaa
atggccagaagtctggtccccaaggctctggagccatacgtgacagaaatggctcaggga
actgttggaggcgtgttcatcacgacggcaggttccacgtctaacggcacaaggttctct
gccagtgacctgaccaacggtgcagatgggatgctggccacaagctccaatgggtctcag
tacagcggctccagggtggagactccggtgtcctacgtcggggaggacgacgaggaggac
gatgacttcaacgagaatgacgaggacgactga

KEGG   Homo sapiens (human): 3065
Entry
3065              CDS       T01001                                 
Symbol
HDAC1, GON-10, HD1, KDAC1, RPD3, RPD3L1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03082  ATP-dependent chromatin remodeling
hsa03083  Polycomb repressive complex
hsa04110  Cell cycle
hsa04213  Longevity regulating pathway - multiple species
hsa04330  Notch signaling pathway
hsa04350  TGF-beta signaling pathway
hsa04613  Neutrophil extracellular trap formation
hsa04919  Thyroid hormone signaling pathway
hsa05016  Huntington disease
hsa05031  Amphetamine addiction
hsa05034  Alcoholism
hsa05165  Human papillomavirus infection
hsa05169  Epstein-Barr virus infection
hsa05200  Pathways in cancer
hsa05202  Transcriptional misregulation in cancer
hsa05203  Viral carcinogenesis
hsa05206  MicroRNAs in cancer
hsa05220  Chronic myeloid leukemia
Network
nt06166  Human papillomavirus (HPV)
nt06240  Transcription (cancer)
nt06461  Huntington disease
nt06516  TNF signaling
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N00118  TEL-AML1 fusion to transcriptional repression
N00375  HPV E7 to TNF-IRF1 signaling pathway
N00980  Mutation-caused aberrant Htt to REST-mediated transcriptional repression
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
Drug target
Abexinostat (DG01402): D10060 D10084
Belinostat: D08870<US>
Bocodepsin (DG03260): D12551 D12552
Entinostat: D09338
Fimepinostat: D11319
Givinostat (DG03284): D12742 D12743<US>
Mocetinostat (DG01404): D09357 D09641
Nanatinostat: D11442
Panobinostat (DG01403): D10019 D10319
Quisinostat (DG01407): D10321 D10322
Remetinostat: D10977
Resminostat: D13021
Romidepsin: D06637<JP/US>
Tacedinaline: D05988
Tinostamustine: D11182
Tucidinostat: D10993<JP>
Vorinostat: D06320<JP/US>
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    3065 (HDAC1)
   03083 Polycomb repressive complex
    3065 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    3065 (HDAC1)
   04350 TGF-beta signaling pathway
    3065 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    3065 (HDAC1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    3065 (HDAC1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    3065 (HDAC1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    3065 (HDAC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    3065 (HDAC1)
   05202 Transcriptional misregulation in cancer
    3065 (HDAC1)
   05206 MicroRNAs in cancer
    3065 (HDAC1)
   05203 Viral carcinogenesis
    3065 (HDAC1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    3065 (HDAC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    3065 (HDAC1)
   05165 Human papillomavirus infection
    3065 (HDAC1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    3065 (HDAC1)
  09165 Substance dependence
   05031 Amphetamine addiction
    3065 (HDAC1)
   05034 Alcoholism
    3065 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    3065 (HDAC1)
Enzymes [BR:hsa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     3065 (HDAC1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     3065 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     3065 (HDAC1)
    BRAF-HDAC complex
     3065 (HDAC1)
    REST complex
     3065 (HDAC1)
    SHIP complex
     3065 (HDAC1)
    MiDAC complex
     3065 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     3065 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    3065 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    3065 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 3065
NCBI-ProteinID: NP_004955
OMIM: 601241
HGNC: 4852
Ensembl: ENSG00000116478
UniProt: Q13547 Q6IT96
Structure
LinkDB
Position
1:32292083..32333626
AA seq 482 aa
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKRISICSSDKRIACEEEF
SDSEEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagacgcagggcacccggaggaaagtctgttactactacgacggggatgttgga
aattactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcataat
ttgctgctcaactatggtctctaccgaaaaatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagcgatgactacattaaattcttgcgctccatccgt
ccagataacatgtcggagtacagcaagcagatgcagagattcaacgttggtgaggactgt
ccagtattcgatggcctgtttgagttctgtcagttgtctactggtggttctgtggcaagt
gctgtgaaacttaataagcagcagacggacatcgctgtgaattgggctgggggcctgcac
catgcaaagaagtccgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtacattgacattgatattcaccatggt
gacggcgtggaagaggccttctacaccacggaccgggtcatgactgtgtcctttcataag
tatggagagtacttcccaggaactggggacctacgggatatcggggctggcaaaggcaag
tattatgctgttaactacccgctccgagacgggattgatgacgagtcctatgaggccatt
ttcaagccggtcatgtccaaagtaatggagatgttccagcctagtgcggtggtcttacag
tgtggctcagactccctatctggggatcggttaggttgcttcaatctaactatcaaagga
cacgccaagtgtgtggaatttgtcaagagctttaacctgcctatgctgatgctgggaggc
ggtggttacaccattcgtaacgttgcccggtgctggacatatgagacagctgtggccctg
gatacggagatccctaatgagcttccatacaatgactactttgaatactttggaccagat
ttcaagctccacatcagtccttccaatatgactaaccagaacacgaatgagtacctggag
aagatcaaacagcgactgtttgagaaccttagaatgctgccgcacgcacctggggtccaa
atgcaggcgattcctgaggacgccatccctgaggagagtggcgatgaggacgaagacgac
cctgacaagcgcatctcgatctgctcctctgacaaacgaattgcctgtgaggaagagttc
tccgattctgaagaggagggagaggggggccgcaagaactcttccaacttcaaaaaagcc
aagagagtcaaaacagaggatgaaaaagagaaagacccagaggagaagaaagaagtcacc
gaagaggagaaaaccaaggaggagaagccagaagccaaaggggtcaaggaggaggtcaag
ttggcctga

KEGG   Homo sapiens (human): 3066
Entry
3066              CDS       T01001                                 
Symbol
HDAC2, HD2, KDAC2, RPD3, YAF1
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03082  ATP-dependent chromatin remodeling
hsa03083  Polycomb repressive complex
hsa04110  Cell cycle
hsa04213  Longevity regulating pathway - multiple species
hsa04330  Notch signaling pathway
hsa04350  TGF-beta signaling pathway
hsa04613  Neutrophil extracellular trap formation
hsa04919  Thyroid hormone signaling pathway
hsa05016  Huntington disease
hsa05031  Amphetamine addiction
hsa05034  Alcoholism
hsa05165  Human papillomavirus infection
hsa05169  Epstein-Barr virus infection
hsa05200  Pathways in cancer
hsa05202  Transcriptional misregulation in cancer
hsa05203  Viral carcinogenesis
hsa05206  MicroRNAs in cancer
hsa05220  Chronic myeloid leukemia
Network
nt06166  Human papillomavirus (HPV)
nt06240  Transcription (cancer)
nt06461  Huntington disease
nt06516  TNF signaling
nt06523  Epigenetic regulation by Polycomb complexes
  Element
N00118  TEL-AML1 fusion to transcriptional repression
N00375  HPV E7 to TNF-IRF1 signaling pathway
N00980  Mutation-caused aberrant Htt to REST-mediated transcriptional repression
N01614  Activation of PRC2.2 by ubiquitination of H2AK119 in germline genes
Drug target
Abexinostat (DG01402): D10060 D10084
Belinostat: D08870<US>
Bocodepsin (DG03260): D12551 D12552
Entinostat: D09338
Fimepinostat: D11319
Givinostat (DG03284): D12742 D12743<US>
Mocetinostat (DG01404): D09357 D09641
Nanatinostat: D11442
Panobinostat (DG01403): D10019 D10319
Quisinostat (DG01407): D10321 D10322
Remetinostat: D10977
Resminostat: D13021
Romidepsin: D06637<JP/US>
Tinostamustine: D11182
Tucidinostat: D10993<JP>
Vorinostat: D06320<JP/US>
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    3066 (HDAC2)
   03083 Polycomb repressive complex
    3066 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    3066 (HDAC2)
   04350 TGF-beta signaling pathway
    3066 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    3066 (HDAC2)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    3066 (HDAC2)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    3066 (HDAC2)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    3066 (HDAC2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    3066 (HDAC2)
   05202 Transcriptional misregulation in cancer
    3066 (HDAC2)
   05206 MicroRNAs in cancer
    3066 (HDAC2)
   05203 Viral carcinogenesis
    3066 (HDAC2)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    3066 (HDAC2)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    3066 (HDAC2)
   05165 Human papillomavirus infection
    3066 (HDAC2)
  09164 Neurodegenerative disease
   05016 Huntington disease
    3066 (HDAC2)
  09165 Substance dependence
   05031 Amphetamine addiction
    3066 (HDAC2)
   05034 Alcoholism
    3066 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    3066 (HDAC2)
Enzymes [BR:hsa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     3066 (HDAC2)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     3066 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     3066 (HDAC2)
    BRAF-HDAC complex
     3066 (HDAC2)
    REST complex
     3066 (HDAC2)
    SHIP complex
     3066 (HDAC2)
    MiDAC complex
     3066 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     3066 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    3066 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    3066 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 3066
NCBI-ProteinID: NP_001518
OMIM: 605164
HGNC: 4853
Ensembl: ENSG00000196591
UniProt: Q92769
Structure
LinkDB
Position
6:complement(113933028..113971148)
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKTDVKEEDKSKDNSGEKTDTKGT
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcaaggaggcggcaaaaaaaaagtctgctactactacgacggtgatatt
ggaaattattattatggacagggtcatcccatgaagcctcatagaatccgcatgacccat
aacttgctgttaaattatggcttatacagaaaaatggaaatatataggccccataaagcc
actgccgaagaaatgacaaaatatcacagtgatgagtatatcaaatttctacggtcaata
agaccagataacatgtctgagtatagtaagcagatgcagagatttaatgttggagaagat
tgtccagtgtttgatggactctttgagttttgtcagctctcaactggcggttcagttgct
ggagctgtgaagttaaaccgacaacagactgatatggctgttaattgggctggaggatta
catcatgctaagaaatcagaagcatcaggattctgttacgttaatgatattgtgcttgcc
atccttgaattactaaagtatcatcagagagtcttatatattgatatagatattcatcat
ggtgatggtgttgaagaagctttttatacaacagatcgtgtaatgacggtatcattccat
aaatatggggaatactttcctggcacaggagacttgagggatattggtgctggaaaaggc
aaatactatgctgtcaattttccaatgagagatggtatagatgatgagtcatatgggcag
atatttaagcctattatctcaaaggtgatggagatgtatcaacctagtgctgtggtatta
cagtgtggtgcagactcattatctggtgatagactgggttgtttcaatctaacagtcaaa
ggtcatgctaaatgtgtagaagttgtaaaaacttttaacttaccattactgatgcttgga
ggaggtggctacacaatccgtaatgttgctcgatgttggacatatgagactgcagttgcc
cttgattgtgagattcccaatgagttgccatataatgattactttgagtattttggacca
gacttcaaactgcatattagtccttcaaacatgacaaaccagaacactccagaatatatg
gaaaagataaaacagcgtttgtttgaaaatttgcgcatgttacctcatgcacctggtgtc
cagatgcaagctattccagaagatgctgttcatgaagacagtggagatgaagatggagaa
gatccagacaagagaatttctattcgagcatcagacaagcggatagcttgtgatgaagaa
ttctcagattctgaggatgaaggagaaggaggtcgaagaaatgtggctgatcataagaaa
ggagcaaagaaagctagaattgaagaagataagaaagaaacagaggacaaaaaaacagac
gttaaggaagaagataaatccaaggacaacagtggtgaaaaaacagataccaaaggaacc
aaatcagaacagctcagcaacccctga

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