KEGG   PATHWAY: jlv00230
Entry
jlv00230                    Pathway                                
Name
Purine metabolism - Janthinobacterium lividum
Class
Metabolism; Nucleotide metabolism
Pathway map
jlv00230  Purine metabolism
jlv00230

Module
jlv_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:jlv00230]
jlv_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:jlv00230]
jlv_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:jlv00230]
jlv_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:jlv00230]
jlv_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:jlv00230]
jlv_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:jlv00230]
jlv_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:jlv00230]
Other DBs
GO: 0006163 0042278
Organism
Janthinobacterium lividum [GN:jlv]
Gene
G3257_21290  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
G3257_06170  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
G3257_24370  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
G3257_25575  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
G3257_03405  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
G3257_22600  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
G3257_24775  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
G3257_24140  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
G3257_15575  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
G3257_15365  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
G3257_27020  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
G3257_26845  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
G3257_11570  hypothetical protein [KO:K01588] [EC:5.4.99.18]
G3257_26850  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
G3257_26855  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
G3257_27805  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
G3257_05150  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
G3257_06105  bifunctional metallophosphatase/5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
G3257_18495  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
G3257_22025  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
G3257_06165  xapA; xanthosine phosphorylase [KO:K03783] [EC:2.4.2.1]
G3257_08715  pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
G3257_18570  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
G3257_01800  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
G3257_13815  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
G3257_21975  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
G3257_23425  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
G3257_06075  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
G3257_06080  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
G3257_14570  xanthine dehydrogenase family protein molybdopterin-binding subunit [KO:K11177] [EC:1.17.1.4]
G3257_14565  xanthine dehydrogenase family protein subunit M [KO:K11178] [EC:1.17.1.4]
G3257_14560  paoA; aldehyde dehydrogenase iron-sulfur subunit [KO:K13483]
G3257_04540  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
G3257_13820  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
G3257_19320  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
G3257_06090  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
G3257_23445  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
G3257_25820  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
G3257_25815  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
G3257_11735  ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
G3257_03340  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
G3257_20230  phosphohydrolase [KO:K06952] [EC:3.1.3.89]
G3257_23455  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
G3257_12400  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
G3257_13445  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K00951] [EC:2.7.6.5]
G3257_22160  CYTH domain-containing protein [KO:K01768] [EC:4.6.1.1]
G3257_22540  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
G3257_21905  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
G3257_25780  carbohydrate kinase family protein [KO:K00856] [EC:2.7.1.20]
G3257_06095  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
G3257_22875  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
G3257_18410  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
G3257_23825  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
G3257_15615  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
G3257_18340  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
G3257_08140  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
G3257_25585  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
G3257_20135  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
G3257_08610  sulfate adenylyltransferase [KO:K00956] [EC:2.7.7.4]
G3257_08615  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
G3257_06065  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
G3257_00105  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
G3257_06070  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
G3257_19640  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
G3257_19645  urease subunit beta [KO:K01429] [EC:3.5.1.5]
G3257_19650  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
jlv00030  Pentose phosphate pathway
jlv00220  Arginine biosynthesis
jlv00250  Alanine, aspartate and glutamate metabolism
jlv00260  Glycine, serine and threonine metabolism
jlv00340  Histidine metabolism
jlv00630  Glyoxylate and dicarboxylate metabolism
jlv00730  Thiamine metabolism
jlv00740  Riboflavin metabolism
jlv00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

DBGET integrated database retrieval system