KEGG   PATHWAY: lcp00230
Entry
lcp00230                    Pathway                                
Name
Purine metabolism - Lysobacter capsici
Class
Metabolism; Nucleotide metabolism
Pathway map
lcp00230  Purine metabolism
lcp00230

Module
lcp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lcp00230]
lcp_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lcp00230]
lcp_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lcp00230]
lcp_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lcp00230]
lcp_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lcp00230]
lcp_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:lcp00230]
Other DBs
GO: 0006163 0042278
Organism
Lysobacter capsici [GN:lcp]
Gene
LC55x_0435  [KO:K15778] [EC:5.4.2.8 5.4.2.2]
LC55x_0470  [KO:K01756] [EC:4.3.2.2]
LC55x_0471  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
LC55x_0582  [KO:K01241] [EC:3.2.2.4]
LC55x_0854  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
LC55x_0857  purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
LC55x_0969  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
LC55x_1010  rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
LC55x_1015  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
LC55x_1019  spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
LC55x_1082  [KO:K00526] [EC:1.17.4.1]
LC55x_1083  [KO:K00525] [EC:1.17.4.1]
LC55x_1334  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
LC55x_1354  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
LC55x_1369  cysD; sulfate adenylyltransferase, small subunit [KO:K00957] [EC:2.7.7.4]
LC55x_1370  cysC; adenylylsulfate kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
LC55x_1617  purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
LC55x_1618  purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
LC55x_1626  [KO:K06966] [EC:3.2.2.10 3.2.2.-]
LC55x_2088  [KO:K01951] [EC:6.3.5.2]
LC55x_2332  [KO:K00940] [EC:2.7.4.6]
LC55x_2350  guaB; inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
LC55x_2351  guaA; guaA GMP synthetase [KO:K01951] [EC:6.3.5.2]
LC55x_2813  [KO:K01081] [EC:3.1.3.5]
LC55x_2862  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
LC55x_2879  add; adenosine deaminase [KO:K21053] [EC:3.5.4.2]
LC55x_3264  [KO:K03651] [EC:3.1.4.53]
LC55x_3421  [KO:K00760] [EC:2.4.2.8]
LC55x_3423  [KO:K01768] [EC:4.6.1.1]
LC55x_3511  [KO:K01524] [EC:3.6.1.11 3.6.1.40]
LC55x_3565  purT; phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
LC55x_3663  purA; adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
LC55x_3687  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
LC55x_3846  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
LC55x_3976  prs; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
LC55x_4052  [KO:K01515] [EC:3.6.1.13 3.6.1.-]
LC55x_4097  [KO:K01525] [EC:3.6.1.41]
LC55x_4127  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
LC55x_4129  [KO:K08312] [EC:3.6.1.-]
LC55x_4160  [KO:K00951] [EC:2.7.6.5]
LC55x_4247  [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
LC55x_4328  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
LC55x_4426  purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
LC55x_4518  hddC3; HD domain-containing protein 3 [KO:K01139] [EC:2.7.6.5 3.1.7.2]
LC55x_4591  [KO:K11177] [EC:1.17.1.4]
LC55x_4592  [KO:K11178] [EC:1.17.1.4]
LC55x_4593  [KO:K13483]
LC55x_4600  [KO:K00525] [EC:1.17.4.1]
LC55x_4669  [KO:K00856] [EC:2.7.1.20]
LC55x_5181  [KO:K01951] [EC:6.3.5.2]
LC55x_5380  prs; ribose-phosphate diphosphokinase family protein [KO:K00948] [EC:2.7.6.1]
LC55x_5555  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
lcp00030  Pentose phosphate pathway
lcp00220  Arginine biosynthesis
lcp00250  Alanine, aspartate and glutamate metabolism
lcp00260  Glycine, serine and threonine metabolism
lcp00340  Histidine metabolism
lcp00630  Glyoxylate and dicarboxylate metabolism
lcp00730  Thiamine metabolism
lcp00740  Riboflavin metabolism
lcp00790  Folate biosynthesis
KO pathway
ko00230   

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