KEGG   PATHWAY: lrs00230
Entry
lrs00230                    Pathway                                
Name
Purine metabolism - Limnoglobus roseus
Class
Metabolism; Nucleotide metabolism
Pathway map
lrs00230  Purine metabolism
lrs00230

Module
lrs_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lrs00230]
lrs_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lrs00230]
lrs_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lrs00230]
lrs_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lrs00230]
lrs_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lrs00230]
Other DBs
GO: 0006163 0042278
Organism
Limnoglobus roseus [GN:lrs]
Gene
PX52LOC_05997  NUDIX domain-containing protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
PX52LOC_04148  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
PX52LOC_03466  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
PX52LOC_03984  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
PX52LOC_05143  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
PX52LOC_01171  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
PX52LOC_05235  purQ; phosphoribosylformylglycinamidine synthase I [KO:K23265] [EC:6.3.5.3 3.5.1.2]
PX52LOC_05248  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23270] [EC:6.3.5.3]
PX52LOC_01238  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
PX52LOC_05500  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
PX52LOC_05501  5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
PX52LOC_01424  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
PX52LOC_07262  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
PX52LOC_07141  bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
PX52LOC_02067  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
PX52LOC_02977  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
PX52LOC_02459  TIGR01457 family HAD-type hydrolase [KO:K02566] [EC:3.1.3.5]
PX52LOC_03116  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
PX52LOC_08107  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
PX52LOC_05994  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
PX52LOC_03026  IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
PX52LOC_01058  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
PX52LOC_01494  rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
PX52LOC_07769  yagR; Putative xanthine dehydrogenase YagR molybdenum-binding subunit [KO:K11177] [EC:1.17.1.4]
PX52LOC_07768  yagS; Putative xanthine dehydrogenase YagS FAD-binding subunit [KO:K11178] [EC:1.17.1.4]
PX52LOC_07767  yagT; Putative xanthine dehydrogenase YagT iron-sulfur-binding subunit [KO:K13483]
PX52LOC_01451  glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
PX52LOC_04229  guanylate kinase [KO:K00942] [EC:2.7.4.8]
PX52LOC_04037  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
PX52LOC_06273  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
PX52LOC_06272  ribonucleoside-diphosphate reductase [KO:K00526] [EC:1.17.4.1]
PX52LOC_06786  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
PX52LOC_08204  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
PX52LOC_00269  HAMP domain-containing protein [KO:K01768] [EC:4.6.1.1]
PX52LOC_00679  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
PX52LOC_01798  response regulator [KO:K01768] [EC:4.6.1.1]
PX52LOC_02297  adenylate/guanylate cyclase domain-containing protein [KO:K01768] [EC:4.6.1.1]
PX52LOC_00458  class IV adenylate cyclase [KO:K05873] [EC:4.6.1.1]
PX52LOC_05467  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
PX52LOC_02121  adenylate kinase [KO:K00939] [EC:2.7.4.3]
PX52LOC_04485  cpdA_1; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [KO:K03651] [EC:3.1.4.53]
PX52LOC_06837  cpdA_3; 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [KO:K03651] [EC:3.1.4.53]
PX52LOC_07920  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
PX52LOC_06787  HIT domain-containing protein [KO:K19710] [EC:2.7.7.53]
PX52LOC_01566  adenylyl-sulfate kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
PX52LOC_05048  adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
PX52LOC_01565  sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
lrs00030  Pentose phosphate pathway
lrs00220  Arginine biosynthesis
lrs00250  Alanine, aspartate and glutamate metabolism
lrs00260  Glycine, serine and threonine metabolism
lrs00340  Histidine metabolism
lrs00630  Glyoxylate and dicarboxylate metabolism
lrs00730  Thiamine metabolism
lrs00740  Riboflavin metabolism
lrs00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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