KEGG   PATHWAY: oas00020
Entry
oas00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Ovis aries (sheep)
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
oas00020  Citrate cycle (TCA cycle)
oas00020

Module
oas_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:oas00020]
oas_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:oas00020]
oas_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:oas00020]
oas_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:oas00020]
oas_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:oas00020]
Other DBs
GO: 0006099
Organism
Ovis aries (sheep) [GN:oas]
Gene
100036762  SDHA; succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
100037690  PCK1; phosphoenolpyruvate carboxykinase, cytosolic [GTP] [KO:K01596] [EC:4.1.1.32]
100302102  FH; fumarate hydratase, mitochondrial [KO:K01679] [EC:4.2.1.2]
101102843  IDH2; isocitrate dehydrogenase [NADP], mitochondrial [KO:K00031] [EC:1.1.1.42]
101103029  [KO:K00161] [EC:1.2.4.1]
101103148  ACO2; aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
101104080  IDH3B; isocitrate dehydrogenase [NAD] subunit beta, mitochondrial isoform X1 [KO:K00030] [EC:1.1.1.41]
101105152  DLD; dihydrolipoyl dehydrogenase, mitochondrial isoform X2 [KO:K00382] [EC:1.8.1.4]
101105616  SDHC; succinate dehydrogenase cytochrome b560 subunit, mitochondrial [KO:K00236]
101107484  PC; pyruvate carboxylase, mitochondrial [KO:K01958] [EC:6.4.1.1]
101108658  DLST; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [KO:K00658] [EC:2.3.1.61]
101108729  SDHB; succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial isoform X3 [KO:K00235] [EC:1.3.5.1]
101109163  CS; citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
101110118  PDHA1; pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial [KO:K00161] [EC:1.2.4.1]
101110910  IDH3G; isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial isoform X1 [KO:K00030] [EC:1.1.1.41]
101110965  DLAT; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X2 [KO:K00627] [EC:2.3.1.12]
101111485  SDHD; succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial isoform X1 [KO:K00237]
101112791  ACO1; cytoplasmic aconitate hydratase [KO:K01681] [EC:4.2.1.3]
101113602  SUCLA2; succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X1 [KO:K01900] [EC:6.2.1.4 6.2.1.5]
101113677  PDHA2; pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial isoform X1 [KO:K00161] [EC:1.2.4.1]
101115360  OGDH; 2-oxoglutarate dehydrogenase complex component E1 isoform X3 [KO:K00164] [EC:1.2.4.2]
101116035  MDH1; malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
101117623  SUCLG2; succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
101118331  OGDHL; 2-oxoglutarate dehydrogenase-like, mitochondrial isoform X1 [KO:K00164] [EC:1.2.4.2]
101120669  PCK2; phosphoenolpyruvate carboxykinase [GTP], mitochondrial [KO:K01596] [EC:4.1.1.32]
101120868  IDH3A; isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [KO:K00030] [EC:1.1.1.41]
101121975  PDHB; pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
101122512  SUCLG1; succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [KO:K01899] [EC:6.2.1.4 6.2.1.5]
114118746  [KO:K01900] [EC:6.2.1.4 6.2.1.5]
443091  MDH2; malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
443257  IDH1; isocitrate dehydrogenase [NADP] cytoplasmic [KO:K00031] [EC:1.1.1.42]
654404  ACLY; ATP-citrate synthase [KO:K01648] [EC:2.3.3.8]
780442  [KO:K00237]
780772  [KO:K00237]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
oas00010  Glycolysis / Gluconeogenesis
oas00053  Ascorbate and aldarate metabolism
oas00061  Fatty acid biosynthesis
oas00062  Fatty acid elongation
oas00071  Fatty acid degradation
oas00190  Oxidative phosphorylation
oas00220  Arginine biosynthesis
oas00250  Alanine, aspartate and glutamate metabolism
oas00280  Valine, leucine and isoleucine degradation
oas00350  Tyrosine metabolism
oas00470  D-Amino acid metabolism
oas00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   

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