KEGG   PATHWAY: aag03015
Entry
aag03015                    Pathway                                
Name
mRNA surveillance pathway - Aedes aegypti (yellow fever mosquito)
Description
The mRNA surveillance pathway is a quality control mechanism that detects and degrades abnormal mRNAs. These pathways include nonsense-mediated mRNA decay (NMD), nonstop mRNA decay (NSD), and no-go decay (NGD). NMD is a mechanism that eliminates mRNAs containing premature translation-termination codons (PTCs). In vertebrates, PTCs trigger efficient NMD when located upstream of an exon junction complex (EJC). Upf3, together with Upf1 and Upf2, may signal the presence of the PTC to the 5'end of the transcript, resulting in decapping and rapid exonucleolytic digestion of the mRNA. In the NSD pathway, which targets mRNAs lacking termination codons, the ribosome is believed to translate through the 3' untranslated region and stall at the end of the poly(A) tail. NSD involves an eRF3-like protein, Ski7p, which is hypothesized to bind the empty A site of the ribosome and recruit the exosome to degrade the mRNA from the 3' end. NGD targets mRNAs with stalls in translation elongation for endonucleolytic cleavage in a process involving the Dom34 and Hbs1 proteins.
Class
Genetic Information Processing; Translation
Pathway map
aag03015  mRNA surveillance pathway
aag03015

Other DBs
GO: 0071028
Organism
Aedes aegypti (yellow fever mosquito) [GN:aag]
Gene
5572517  nuclear cap-binding protein subunit 1 [KO:K12882]
5567547  nuclear cap-binding protein subunit 2 [KO:K12883]
5578853  regulator of nonsense transcripts 3B [KO:K14328]
5568291  RNA-binding protein 8A [KO:K12876]
5574943  protein mago nashi [KO:K12877]
5576233  putative mediator of RNA polymerase II transcription subunit 12 [KO:K14323]
5564379  eukaryotic initiation factor 4A-III [KO:K13025] [EC:5.6.2.7]
5564272  histone deacetylase complex subunit SAP18 [KO:K14324]
5578145  pinin [KO:K13114]
5579234  apoptotic chromatin condensation inducer in the nucleus [KO:K12875]
110676550  RNA-binding protein with serine-rich domain 1-A-like [KO:K14325]
5566793  THO complex subunit 4-A [KO:K12881]
5572595  DEAD-box helicase Dbp80 [KO:K18655] [EC:5.6.2.7]
5575707  DEAD-box helicase Dbp80 [KO:K18655] [EC:5.6.2.7]
5573261  nucleoporin GLE1 [KO:K18723]
5567843  nuclear RNA export factor 1 [KO:K14284]
5567391  nuclear RNA export factor 2 [KO:K14284]
5572053  NTF2-related export protein [KO:K14285]
5566456  NTF2-related export protein [KO:K14285]
110674684  NTF2-related export protein-like [KO:K14285]
110674367  NTF2-related export protein-like [KO:K14285]
5563979  NTF2-related export protein [KO:K14285]
110674046  NTF2-related export protein-like [KO:K14285]
5572073  NTF2-related export protein [KO:K14285]
110676329  NTF2-related export protein-like [KO:K14285]
110675118  NTF2-related export protein-like [KO:K14285]
5573333  NTF2-related export protein [KO:K14285]
5570584  NTF2-related export protein [KO:K14285]
5574226  NTF2-related export protein [KO:K14285]
5571556  NTF2-related export protein [KO:K14285]
5564555  NTF2-related export protein [KO:K14285]
110677138  NTF2-related export protein-like [KO:K14285]
110678011  NTF2-related export protein-like [KO:K14285]
110677779  NTF2-related export protein-like [KO:K14285]
110678393  NTF2-related export protein 2-like [KO:K14285]
5570145  NTF2-related export protein [KO:K14285]
5574107  NTF2-related export protein [KO:K14285]
5569076  ATP-dependent RNA helicase WM6 [KO:K12812] [EC:5.6.2.7]
5576411  partner of Y14 and mago [KO:K14294]
23687946  serine/arginine repetitive matrix protein 1 isoform X1 [KO:K13171]
5575290  mRNA-capping enzyme [KO:K13917] [EC:2.7.7.50 3.6.1.74]
110681192  mRNA cap guanine-N7 methyltransferase-like [KO:K00565] [EC:2.1.1.56]
5575231  mRNA cap guanine-N7 methyltransferase [KO:K00565] [EC:2.1.1.56]
110674160  RNA-binding protein cabeza-like isoform X1 [KO:K13098]
5566429  RNA-binding protein cabeza [KO:K13098]
110679098  TAR DNA-binding protein 43-like [KO:K23600]
5566366  LOW QUALITY PROTEIN: polyadenylate-binding protein 2 [KO:K14396]
5570338  cleavage and polyadenylation specificity factor subunit 5 [KO:K14397]
23687584  cleavage and polyadenylation specificity factor subunit CG7185 isoform X2 [KO:K14398]
5566394  poly(A) polymerase beta [KO:K14376] [EC:2.7.7.19]
5571757  protein CLP1 homolog [KO:K14399] [EC:2.7.1.78]
5575101  uncharacterized protein LOC5575101 isoform X1 [KO:K14400]
5566867  cleavage and polyadenylation specificity factor subunit 1 [KO:K14401]
5567787  probable cleavage and polyadenylation specificity factor subunit 2 [KO:K14402]
5569752  cleavage and polyadenylation specificity factor 73 [KO:K14403] [EC:3.1.27.-]
23687406  cleavage and polyadenylation specificity factor subunit 4 [KO:K14404]
5570138  pre-mRNA 3'-end-processing factor FIP1 [KO:K14405]
5572560  pre-mRNA 3' end processing protein WDR33 [KO:K15542]
5569068  WD repeat-containing protein 82 [KO:K14962]
5571745  serine/threonine-protein phosphatase alpha-2 isoform isoform X1 [KO:K06269] [EC:3.1.3.16]
5577439  serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 [KO:K06269] [EC:3.1.3.16]
5566415  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [KO:K15544] [EC:3.1.3.16]
5563784  cleavage stimulation factor subunit 1 [KO:K14406]
5578827  cleavage stimulation factor subunit 2 tau variant [KO:K14407]
5566958  protein suppressor of forked [KO:K14408]
5580150  symplekin [KO:K06100]
5570318  heterogeneous nuclear ribonucleoprotein 27C [KO:K14411]
5566288  RNA-binding protein Musashi homolog Rbp6 isoform X1 [KO:K14411]
5567380  RNA-binding protein Musashi homolog Rbp6 isoform X1 [KO:K14411]
5573211  polyadenylate-binding protein [KO:K13126]
5575273  eukaryotic peptide chain release factor subunit 1 [KO:K03265]
23687788  eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 [KO:K03267]
5575411  regulator of nonsense transcripts 1 homolog [KO:K14326] [EC:5.6.2.5 5.6.2.3]
5573561  regulator of nonsense transcripts 2 [KO:K14327]
5580104  serine/threonine-protein kinase Smg1 [KO:K08873] [EC:2.7.11.1]
5565770  protein SMG5 [KO:K11125]
5579825  uncharacterized protein LOC5579825 isoform X1 [KO:K11124] [EC:3.1.-.-]
5579826  uncharacterized protein LOC5579826 isoform X4 [KO:K11124] [EC:3.1.-.-]
5580325  serine/threonine-protein phosphatase PP2A [KO:K04382] [EC:3.1.3.16]
5568618  serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit [KO:K03456]
5579206  protein phosphatase PP2A 55 kDa regulatory subunit isoform X2 [KO:K04354]
5576224  serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma [KO:K11583]
5577684  uncharacterized protein LOC5577684 isoform X1 [KO:K11583]
5579157  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform [KO:K11584]
5570245  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform [KO:K11584]
5566879  HBS1-like protein [KO:K14416]
110681137  HBS1-like protein [KO:K14416]
5569713  protein pelota [KO:K06965]
Reference
  Authors
Maquat LE
  Title
Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics.
  Journal
Nat Rev Mol Cell Biol 5:89-99 (2004)
DOI:10.1038/nrm1310
Reference
  Authors
Amrani N, Sachs MS, Jacobson A
  Title
Early nonsense: mRNA decay solves a translational problem.
  Journal
Nat Rev Mol Cell Biol 7:415-25 (2006)
DOI:10.1038/nrm1942
Reference
  Authors
Eulalio A, Behm-Ansmant I, Izaurralde E
  Title
P bodies: at the crossroads of post-transcriptional pathways.
  Journal
Nat Rev Mol Cell Biol 8:9-22 (2007)
DOI:10.1038/nrm2080
Reference
  Authors
Mandel CR, Bai Y, Tong L
  Title
Protein factors in pre-mRNA 3'-end processing.
  Journal
Cell Mol Life Sci 65:1099-122 (2008)
DOI:10.1007/s00018-007-7474-3
Reference
  Authors
Clement SL, Lykke-Andersen J
  Title
No mercy for messages that mess with the ribosome.
  Journal
Nat Struct Mol Biol 13:299-301 (2006)
DOI:10.1038/nsmb0406-299
Related
pathway
aag03013  Nucleocytoplasmic transport
aag03018  RNA degradation
aag03040  Spliceosome
KO pathway
ko03015   
LinkDB

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