KEGG   PATHWAY: acro00630
Entry
acro00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Aliiroseovarius crassostreae
Class
Metabolism; Carbohydrate metabolism
Pathway map
acro00630  Glyoxylate and dicarboxylate metabolism
acro00630

Module
acro_M00373  Ethylmalonyl pathway [PATH:acro00630]
acro_M00621  Glycine cleavage system [PATH:acro00630]
acro_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:acro00630]
Other DBs
GO: 0046487 0043648
Organism
Aliiroseovarius crassostreae [GN:acro]
Gene
K3J57_04130  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
K3J57_08515  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
K3J57_13045  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
K3J57_05350  malate synthase G [KO:K01638] [EC:2.3.3.9]
K3J57_02810  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
K3J57_00100  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
K3J57_09015  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
K3J57_15880  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
K3J57_03715  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
K3J57_04115  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
K3J57_11490  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
K3J57_11655  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
K3J57_13175  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
K3J57_11485  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
K3J57_02630  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
K3J57_10545  ccrA; crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
K3J57_11330  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
K3J57_10555  protein meaA [KO:K14447] [EC:5.4.99.63]
K3J57_01055  acyl-CoA/acyl-ACP dehydrogenase [KO:K14448] [EC:1.3.8.12]
K3J57_02785  MaoC family dehydratase [KO:K14449] [EC:4.2.1.148]
K3J57_12105  L-malyl-CoA/beta-methylmalyl-CoA lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
K3J57_02795  CoA ester lyase [KO:K14451] [EC:3.1.2.30]
K3J57_03300  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
K3J57_03275  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
K3J57_03310  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
K3J57_03050  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
K3J57_03055  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
K3J57_03060  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
K3J57_02365  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
K3J57_02500  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
K3J57_01445  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
K3J57_08235  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
K3J57_08490  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
K3J57_12535  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
K3J57_03545  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
K3J57_03830  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
K3J57_05030  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
K3J57_08990  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
K3J57_15940  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
K3J57_03635  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
K3J57_15735  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
K3J57_15725  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
K3J57_02845  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K3J57_07580  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
K3J57_02420  gcvH; glycine cleavage system protein GcvH [KO:K02437]
K3J57_15730  gcvH; glycine cleavage system protein GcvH [KO:K02437]
K3J57_02900  glycerate kinase [KO:K11529] [EC:2.7.1.165]
K3J57_07145  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
K3J57_12305  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
K3J57_10235  NAD(P)H-dependent oxidoreductase subunit E [KO:K22515] [EC:1.17.1.9]
K3J57_14540  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
acro00010  Glycolysis / Gluconeogenesis
acro00020  Citrate cycle (TCA cycle)
acro00030  Pentose phosphate pathway
acro00053  Ascorbate and aldarate metabolism
acro00071  Fatty acid degradation
acro00230  Purine metabolism
acro00250  Alanine, aspartate and glutamate metabolism
acro00260  Glycine, serine and threonine metabolism
acro00620  Pyruvate metabolism
acro00710  Carbon fixation by Calvin cycle
acro00750  Vitamin B6 metabolism
acro00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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