PATHWAY: amih00470
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Entry
amih00470 Pathway
Name
D-Amino acid metabolism - Aminobacter sp. MSH1
Class
Metabolism; Metabolism of other amino acids
BRITE hierarchy
Pathway map
amih00470
D-Amino acid metabolism
Ortholog table
Other DBs
GO:
0046416
Organism
Aminobacter sp. MSH1 [GN:
amih
]
Gene
CO731_00579
alr; Alanine racemase [KO:
K01775
] [EC:
5.1.1.1
]
CO731_03395
dat; D-alanine aminotransferase [KO:
K00824
] [EC:
2.6.1.21
]
CO731_02793
ddl; D-alanine--D-alanine ligase [KO:
K01921
] [EC:
6.3.2.4
]
CO731_01395
ddlA; D-alanine--D-alanine ligase A [KO:
K01921
] [EC:
6.3.2.4
]
CO731_02882
glsA; Thermolabile glutaminase [KO:
K01425
] [EC:
3.5.1.2
]
CO731_03069
purQ; Phosphoribosylformylglycinamidine synthase 1 [KO:
K23265
] [EC:
6.3.5.3
3.5.1.2
]
CO731_03866
murI; Glutamate racemase [KO:
K01776
] [EC:
5.1.1.3
]
CO731_02788
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [KO:
K01925
] [EC:
6.3.2.9
]
CO731_03284
ycjG; L-Ala-D/L-Glu epimerase [KO:
K19802
] [EC:
5.1.1.20
5.1.1.25
]
CO731_03415
Aspartate racemase [KO:
K01779
] [EC:
5.1.1.13
]
CO731_01655
dsdA; D-serine dehydratase [KO:
K01753
] [EC:
4.3.1.18
]
CO731_01065
dapF; Diaminopimelate epimerase [KO:
K01778
] [EC:
5.1.1.7
]
CO731_01737
lysA; Diaminopimelate decarboxylase [KO:
K01586
] [EC:
4.1.1.20
]
CO731_02274
soxA_2; Monomeric sarcosine oxidase [KO:
K19746
] [EC:
1.4.99.6
]
CO731_05019
arg; Arginase [KO:
K21898
] [EC:
5.1.1.12
]
CO731_01052
Proline racemase [KO:
K01777
] [EC:
5.1.1.4
]
CO731_01295
4-hydroxyproline epimerase [KO:
K12658
] [EC:
5.1.1.8
]
CO731_00323
hcnA; Hydrogen cyanide synthase subunit HcnA [KO:
K22550
]
CO731_01293
dapA_2; 4-hydroxy-tetrahydrodipicolinate synthase [KO:
K21062
] [EC:
3.5.4.22
]
CO731_00580
dadA_2; D-amino acid dehydrogenase small subunit [KO:
K00285
] [EC:
1.4.5.1
]
CO731_01286
dadA_3; D-amino acid dehydrogenase small subunit [KO:
K00285
] [EC:
1.4.5.1
]
CO731_05020
dadA_5; D-amino acid dehydrogenase small subunit [KO:
K00285
] [EC:
1.4.5.1
]
CO731_05398
dadA_6; D-amino acid dehydrogenase small subunit [KO:
K00285
] [EC:
1.4.5.1
]
Compound
C00022
Pyruvate
C00025
L-Glutamate
C00026
2-Oxoglutarate
C00036
Oxaloacetate
C00037
Glycine
C00041
L-Alanine
C00047
L-Lysine
C00049
L-Aspartate
C00062
L-Arginine
C00064
L-Glutamine
C00065
L-Serine
C00073
L-Methionine
C00077
L-Ornithine
C00079
L-Phenylalanine
C00084
Acetaldehyde
C00097
L-Cysteine
C00133
D-Alanine
C00134
Putrescine
C00135
L-Histidine
C00148
L-Proline
C00166
Phenylpyruvate
C00188
L-Threonine
C00217
D-Glutamate
C00402
D-Aspartate
C00431
5-Aminopentanoate
C00433
2,5-Dioxopentanoate
C00515
D-Ornithine
C00624
N-Acetyl-L-glutamate
C00666
LL-2,6-Diaminoheptanedioate
C00680
meso-2,6-Diaminoheptanedioate
C00692
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
C00739
D-Lysine
C00740
D-Serine
C00763
D-Proline
C00792
D-Arginine
C00793
D-Cysteine
C00819
D-Glutamine
C00820
D-Threonine
C00855
D-Methionine
C00993
D-Alanyl-D-alanine
C01110
5-Amino-2-oxopentanoic acid
C01157
Hydroxyproline
C01180
4-Methylthio-2-oxobutanoic acid
C01667
Bacitracin
C01672
Cadaverine
C01726
D-Lombricine
C02237
5-Oxo-D-proline
C02265
D-Phenylalanine
C02855
N-Phospho-D-lombricine
C03239
6-Amino-2-oxohexanoate
C03341
2-Amino-4-oxopentanoic acid
C03440
cis-4-Hydroxy-D-proline
C03564
1-Pyrroline-2-carboxylate
C03771
5-Guanidino-2-oxopentanoate
C03933
5-D-Glutamyl-D-glutamyl-peptide
C03943
(2R,4S)-2,4-Diaminopentanoate
C04260
O-D-Alanyl-poly(ribitol phosphate)
C04282
1-Pyrroline-4-hydroxy-2-carboxylate
C04457
D-Alanyl-alanyl-poly(glycerolphosphate)
C05161
(2R,5S)-2,5-Diaminohexanoate
C05620
N-Acetyl-D-phenylalanine
C05825
2-Amino-5-oxohexanoate
C05939
Linatine
C05941
2-Oxo-4-hydroxy-5-aminovalerate
C05942
Pyrrole-2-carboxylate
C06419
D-Histidine
C22024
Staphylopine
C22025
(2S)-2-Amino-4-{[(1R)-1-carboxy-2-(1H-imidazol-4-yl)ethyl]amino}butanoate
C22611
N-Acetyl-D-glutamate
Reference
PMID:
33788945
Authors
Miyamoto T, Homma H
Title
D-Amino acid metabolism in bacteria.
Journal
J Biochem 170:5-13 (2021)
DOI:
10.1093/jb/mvab043
Reference
PMID:
27230378
Authors
Ghssein G, Brutesco C, Ouerdane L, Fojcik C, Izaute A, Wang S, Hajjar C, Lobinski R, Lemaire D, Richaud P, Voulhoux R, Espaillat A, Cava F, Pignol D, Borezee-Durant E, Arnoux P
Title
Biosynthesis of a broad-spectrum nicotianamine-like metallophore in Staphylococcus aureus.
Journal
Science 352:1105-9 (2016)
DOI:
10.1126/science.aaf1018
Related
pathway
amih00010
Glycolysis / Gluconeogenesis
amih00020
Citrate cycle (TCA cycle)
amih00250
Alanine, aspartate and glutamate metabolism
amih00260
Glycine, serine and threonine metabolism
amih00270
Cysteine and methionine metabolism
amih00300
Lysine biosynthesis
amih00310
Lysine degradation
amih00330
Arginine and proline metabolism
amih00340
Histidine metabolism
amih00360
Phenylalanine metabolism
amih00550
Peptidoglycan biosynthesis
amih00620
Pyruvate metabolism
KO pathway
ko00470
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