KEGG   PATHWAY: amyc03440
Entry
amyc03440                   Pathway                                
Name
Homologous recombination - Amycolatopsis sp. AA4
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
amyc03440  Homologous recombination
amyc03440

Other DBs
GO: 0000724
Organism
Amycolatopsis sp. AA4 [GN:amyc]
Gene
CU254_38990  single-stranded DNA-binding protein [KO:K03111]
CU254_19840  single-stranded DNA-binding protein [KO:K03111]
CU254_39295  DNA replication/repair protein RecF [KO:K03629]
CU254_26435  DNA repair protein RecO [KO:K03584]
CU254_37130  recombination protein RecR [KO:K06187]
CU254_09555  recA; recombinase RecA [KO:K03553]
CU254_22895  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
CU254_21500  Holliday junction branch migration protein RuvA [KO:K03550]
CU254_21495  Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
CU254_21505  crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
CU254_07165  DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
CU254_42250  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
CU254_08660  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
CU254_13265  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
CU254_39285  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
CU254_36825  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
CU254_29455  hypothetical protein [KO:K02338] [EC:2.7.7.7]
CU254_37150  DNA polymerase III subunit gamma and tau [KO:K02343] [EC:2.7.7.7]
CU254_26740  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
CU254_36495  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
CU254_40140  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
CU254_08930  hypothetical protein [KO:K02342] [EC:2.7.7.7]
CU254_11530  primosome assembly protein PriA [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
LinkDB

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