KEGG   PATHWAY: aty00230
Entry
aty00230                    Pathway                                
Name
Purine metabolism - Acidiferrobacter thiooxydans
Class
Metabolism; Nucleotide metabolism
Pathway map
aty00230  Purine metabolism
aty00230

Module
aty_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:aty00230]
aty_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:aty00230]
aty_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:aty00230]
aty_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:aty00230]
aty_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:aty00230]
Other DBs
GO: 0006163 0042278
Organism
Acidiferrobacter thiooxydans [GN:aty]
Gene
A9R16_012460  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
A9R16_002020  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
A9R16_004160  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
A9R16_000430  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
A9R16_012385  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
A9R16_001860  purT; formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
A9R16_012700  purL; phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
A9R16_012380  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
A9R16_013845  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
A9R16_013850  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
A9R16_010700  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
A9R16_009590  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
A9R16_000435  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
A9R16_008450  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
A9R16_000205  yrfG; GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
A9R16_009470  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
A9R16_004855  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
A9R16_005650  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
A9R16_005595  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
A9R16_014530  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
A9R16_005655  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
A9R16_003740  amidohydrolase family protein [KO:K01487] [EC:3.5.4.3]
A9R16_014505  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
A9R16_014755  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
A9R16_014760  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
A9R16_014805  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
A9R16_001105  ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
A9R16_008805  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
A9R16_008010  hypothetical protein [KO:K06952] [EC:3.1.3.89]
A9R16_014495  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
A9R16_006145  Ppx/GppA family phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
A9R16_009125  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
A9R16_014335  carbohydrate kinase family protein [KO:K00856] [EC:2.7.1.20]
A9R16_004485  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
A9R16_001445  TIGR00282 family metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
A9R16_000855  adenylate kinase [KO:K00939] [EC:2.7.4.3]
A9R16_000610  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
A9R16_009960  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
A9R16_014075  50S ribosome-binding GTPase [KO:K00956] [EC:2.7.7.4]
A9R16_014080  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
A9R16_013555  sat; sulfate adenylyltransferase [KO:K00958] [EC:2.7.7.4]
A9R16_003770  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
A9R16_014585  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
A9R16_014590  urease subunit beta [KO:K01429] [EC:3.5.1.5]
A9R16_014595  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
A9R16_003735  gamma-glutamyltransferase [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
aty00030  Pentose phosphate pathway
aty00220  Arginine biosynthesis
aty00250  Alanine, aspartate and glutamate metabolism
aty00260  Glycine, serine and threonine metabolism
aty00340  Histidine metabolism
aty00630  Glyoxylate and dicarboxylate metabolism
aty00730  Thiamine metabolism
aty00740  Riboflavin metabolism
aty00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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