KEGG   PATHWAY: bsol00630
Entry
bsol00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Baekduia soli
Class
Metabolism; Carbohydrate metabolism
Pathway map
bsol00630  Glyoxylate and dicarboxylate metabolism
bsol00630

Module
bsol_M00621  Glycine cleavage system [PATH:bsol00630]
Other DBs
GO: 0046487 0043648
Organism
Baekduia soli [GN:bsol]
Gene
FSW04_06020  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FSW04_06030  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
FSW04_14870  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FSW04_11095  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
FSW04_11395  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
FSW04_07195  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
FSW04_07655  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
FSW04_02720  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
FSW04_05815  citrate synthase [KO:K01647] [EC:2.3.3.1]
FSW04_05515  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
FSW04_08705  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FSW04_01710  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FSW04_09010  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FSW04_23475  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FSW04_01990  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
FSW04_02150  propanoyl-CoA acyltransferase [KO:K00626] [EC:2.3.1.9]
FSW04_02155  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
FSW04_11295  hypothetical protein [KO:K17865] [EC:4.2.1.55]
FSW04_11415  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
FSW04_11630  ccrA; crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
FSW04_25240  hypothetical protein [KO:K05606] [EC:5.1.99.1]
FSW04_03150  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
FSW04_25115  VOC family protein [KO:K05606] [EC:5.1.99.1]
FSW04_11595  protein meaA [KO:K14447] [EC:5.4.99.63]
FSW04_11520  CoA ester lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
FSW04_20430  CoA ester lyase [KO:K14451] [EC:3.1.2.30]
FSW04_01070  acetyl-CoA carboxylase biotin carboxylase subunit [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
FSW04_09050  cobalamin B12-binding domain-containing protein [KO:K01849] [EC:5.4.99.2]
FSW04_02330  cobalamin B12-binding domain-containing protein [KO:K01849] [EC:5.4.99.2]
FSW04_02320  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
FSW04_00960  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
FSW04_24130  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
FSW04_00285  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
FSW04_07210  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
FSW04_17985  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
FSW04_07260  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
FSW04_07200  4Fe-4S dicluster domain-containing protein [KO:K11473] [EC:1.1.99.14]
FSW04_08695  catalase [KO:K03781] [EC:1.11.1.6]
FSW04_07285  hypothetical protein [KO:K00018] [EC:1.1.1.29]
FSW04_20755  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
FSW04_05540  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
FSW04_23125  glutamine synthetase type III [KO:K01915] [EC:6.3.1.2]
FSW04_01355  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FSW04_01410  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FSW04_11005  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FSW04_11065  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FSW04_09105  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
FSW04_14215  aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
FSW04_14220  glycine dehydrogenase subunit 2 [KO:K00283] [EC:1.4.4.2]
FSW04_14205  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
FSW04_07090  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FSW04_04665  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FSW04_14210  gcvH; glycine cleavage system protein GcvH [KO:K02437]
FSW04_01165  glycerate kinase [KO:K00865] [EC:2.7.1.165]
FSW04_13135  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
FSW04_18295  molybdopterin-dependent oxidoreductase [KO:K00123] [EC:1.17.1.9]
FSW04_07390  hypothetical protein [KO:K00123] [EC:1.17.1.9]
FSW04_12415  molybdopterin-dependent oxidoreductase [KO:K00123] [EC:1.17.1.9]
FSW04_12410  4Fe-4S dicluster domain-containing protein [KO:K00124]
FSW04_18290  4Fe-4S dicluster domain-containing protein [KO:K00124]
FSW04_11115  hypothetical protein [KO:K00127]
FSW04_01735  cyclase family protein [KO:K07130] [EC:3.5.1.9]
FSW04_06535  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
FSW04_13130  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
FSW04_12565  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bsol00010  Glycolysis / Gluconeogenesis
bsol00020  Citrate cycle (TCA cycle)
bsol00030  Pentose phosphate pathway
bsol00053  Ascorbate and aldarate metabolism
bsol00071  Fatty acid degradation
bsol00230  Purine metabolism
bsol00250  Alanine, aspartate and glutamate metabolism
bsol00260  Glycine, serine and threonine metabolism
bsol00620  Pyruvate metabolism
bsol00710  Carbon fixation by Calvin cycle
bsol00750  Vitamin B6 metabolism
bsol00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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