KEGG   PATHWAY: bxb00010
Entry
bxb00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Paraburkholderia xenovorans LB400
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bxb00010  Glycolysis / Gluconeogenesis
bxb00010

Module
bxb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bxb00010]
bxb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bxb00010]
bxb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bxb00010]
Other DBs
GO: 0006096 0006094
Organism
Paraburkholderia xenovorans LB400 [GN:bxb]
Gene
DR64_1155  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
DR64_4436  phosphoglucose isomerase family protein [KO:K01810] [EC:5.3.1.9]
DR64_3083  fructose-1-6-bisphosphatase family protein [KO:K03841] [EC:3.1.3.11]
DR64_4778  fructose-1-6-bisphosphatase family protein [KO:K01086] [EC:3.1.3.11 3.1.3.37]
DR64_6642  fbab; fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
DR64_4775  fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype [KO:K01624] [EC:4.1.2.13]
DR64_2859  fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype [KO:K01624] [EC:4.1.2.13]
DR64_919  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
DR64_2739  gap; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
DR64_2857  phosphoglycerate kinase family protein [KO:K00927] [EC:2.7.2.3]
DR64_6303  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
DR64_1859  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
DR64_2781  histidine phosphatase super family protein [KO:K15634] [EC:5.4.2.11]
DR64_3734  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
DR64_7950  hypothetical protein [KO:K01689] [EC:4.2.1.11]
DR64_2858  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DR64_4978  PEP-utilizing enzyme, mobile domain protein [KO:K01006] [EC:2.7.9.1]
DR64_3864  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
DR64_2145  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
DR64_3702  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
DR64_8738  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
DR64_3703  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
DR64_5655  acoC; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system [KO:K00627] [EC:2.3.1.12]
DR64_7593  e3 binding domain protein [KO:K00627] [EC:2.3.1.12]
DR64_3704  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DR64_5912  lpd3; dihydrolipoyl dehydrogenase 3 [KO:K00382] [EC:1.8.1.4]
DR64_492  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DR64_7594  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DR64_2881  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
DR64_4005  zinc-binding alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
DR64_4034  zinc-binding dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
DR64_7920  zinc-binding dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
DR64_7059  zinc-binding dehydrogenase family protein [KO:K13979] [EC:1.1.1.2]
DR64_5647  PQQ-dependent dehydrogenase, methanol/ethanol family protein [KO:K00114] [EC:1.1.2.8]
DR64_4744  PQQ-dependent dehydrogenase, methanol/ethanol family protein [KO:K00114] [EC:1.1.2.8]
DR64_6997  cytochrome c family protein [KO:K22474] [EC:1.1.5.5]
DR64_6296  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DR64_4591  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DR64_1101  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DR64_1296  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DR64_6799  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DR64_6705  acyl-CoA reductase family protein [KO:K00128] [EC:1.2.1.3]
DR64_5051  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DR64_8539  acyl-CoA reductase family protein [KO:K00128] [EC:1.2.1.3]
DR64_7727  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DR64_4103  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DR64_4478  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
DR64_5646  acoD; acetaldehyde dehydrogenase 2 [KO:K00138] [EC:1.2.1.-]
DR64_2116  acoD; acetaldehyde dehydrogenase 2 [KO:K00138] [EC:1.2.1.-]
DR64_3558  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
DR64_4024  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DR64_6404  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
DR64_452  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
DR64_802  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DR64_1272  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
DR64_6330  coA binding domain protein [KO:K24012] [EC:6.2.1.13]
DR64_4957  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
DR64_7062  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
DR64_2726  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
DR64_2013  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
DR64_6580  HAD hydrolase, IA, variant 3 family protein [KO:K20866] [EC:3.1.3.10]
DR64_6826  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
DR64_7902  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
DR64_1393  phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein [KO:K15778] [EC:5.4.2.8 5.4.2.2]
DR64_5560  ROK family protein [KO:K00886] [EC:2.7.1.63]
DR64_2096  phosphoenolpyruvate carboxykinase family protein [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
bxb00020  Citrate cycle (TCA cycle)
bxb00030  Pentose phosphate pathway
bxb00500  Starch and sucrose metabolism
bxb00620  Pyruvate metabolism
bxb00640  Propanoate metabolism
bxb00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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