KEGG   PATHWAY: cbaa00230
Entry
cbaa00230                   Pathway                                
Name
Purine metabolism - Serpentinimonas raichei
Class
Metabolism; Nucleotide metabolism
Pathway map
cbaa00230  Purine metabolism
cbaa00230

Module
cbaa_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cbaa00230]
cbaa_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cbaa00230]
cbaa_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cbaa00230]
cbaa_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cbaa00230]
cbaa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cbaa00230]
Other DBs
GO: 0006163 0042278
Organism
Serpentinimonas raichei [GN:cbaa]
Gene
SRAA_1115  phosphoribosylpyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
SRAA_1481  purF; glutamine phosphoribosylpyrophosphate amidotransferase [KO:K00764] [EC:2.4.2.14]
SRAA_0791  purD; phosphoribosylamine-glycine ligase [KO:K01945] [EC:6.3.4.13]
SRAA_1772  purN; folate-dependent phosphoribosylglycinamide formyltransferase PurN [KO:K11175] [EC:2.1.2.2]
SRAA_1034  phosphoribosylformylglycinamidine FGAM synthase, synthetase domain [KO:K01952] [EC:6.3.5.3]
SRAA_1734  purM; phosphoribosylaminoimidazole AIR synthetase [KO:K01933] [EC:6.3.3.1]
SRAA_2223  phosphoribosylaminoimidazole carboxylase [KO:K01589] [EC:6.3.4.18]
SRAA_2224  purE; phosphoribosylcarboxyaminoimidazole NCAIR mutase [KO:K01588] [EC:5.4.99.18]
SRAA_2227  purC; phosphoribosylaminoimidazolesuccinocarboxamide SAICAR synthase [KO:K01923] [EC:6.3.2.6]
SRAA_1980  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
SRAA_1223  purH; AICAR transformylase/IMP cyclohydrolase PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
SRAA_1845  apt; adenine/guanine phosphoribosyltransferase and related PRPP-binding protein [KO:K00759] [EC:2.4.2.7]
SRAA_1770  hypothetical protein [KO:K01081] [EC:3.1.3.5]
SRAA_1860  5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterase [KO:K01081] [EC:3.1.3.5]
SRAA_1409  surE; predicted acid phosphatase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
SRAA_1485  yaiE; uncharacterized protein conserved in bacteria [KO:K09913] [EC:2.4.2.1 2.4.2.2]
SRAA_0590  uncharacterized conserved protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
SRAA_0918  IMP dehydrogenase/GMP reductase [KO:K00088] [EC:1.1.1.205]
SRAA_0638  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
SRAA_1259  xanthosine triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
SRAA_0921  guaA; GMP synthase, PP-ATPase domain/subunit [KO:K01951] [EC:6.3.5.2]
SRAA_1264  guanylate kinase [KO:K00942] [EC:2.7.4.8]
SRAA_1635  ribonucleotide reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
SRAA_0062  ribonucleotide reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
SRAA_1636  nrdB; ribonucleotide reductase, beta subunit [KO:K00526] [EC:1.17.4.1]
SRAA_0276  dGTP triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
SRAA_1266  guanosine polyphosphate pyrophosphohydrolase/synthetase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
SRAA_0697  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
SRAA_0548  guanosine polyphosphate pyrophosphohydrolase/synthetase [KO:K00951] [EC:2.7.6.5]
SRAA_2271  predicted transmembrane sensor domain [KO:K01768] [EC:4.6.1.1]
SRAA_0681  purA; adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
SRAA_1638  sugar kinase, ribokinase family [KO:K00856] [EC:2.7.1.20]
SRAA_1881  amn; nucleoside phosphorylase [KO:K01241] [EC:3.2.2.4]
SRAA_0953  adk; adenylate kinase and related kinase [KO:K00939] [EC:2.7.4.3]
SRAA_0163  predicted phosphohydrolase [KO:K03651] [EC:3.1.4.53]
SRAA_1602  diadenosine tetraphosphatase and related serine/threonine protein phosphatase [KO:K01525] [EC:3.6.1.41]
SRAA_1183  GTPase, sulfate adenylate transferase subunit 1 [KO:K00956] [EC:2.7.7.4]
SRAA_1182  cysD-1; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase/FAD synthetase and related enzymes [KO:K00957] [EC:2.7.7.4]
SRAA_1945  ureC; urea amidohydrolase (urease) alpha subunit [KO:K01428] [EC:3.5.1.5]
SRAA_1944  ureB; urea amidohydrolase (urease) beta subunit [KO:K01429] [EC:3.5.1.5]
SRAA_1942  ureA; urea amidohydrolase (urease) gamma subunit [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
cbaa00030  Pentose phosphate pathway
cbaa00220  Arginine biosynthesis
cbaa00250  Alanine, aspartate and glutamate metabolism
cbaa00260  Glycine, serine and threonine metabolism
cbaa00340  Histidine metabolism
cbaa00630  Glyoxylate and dicarboxylate metabolism
cbaa00730  Thiamine metabolism
cbaa00740  Riboflavin metabolism
cbaa00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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