KEGG   PATHWAY: cheb00230
Entry
cheb00230                   Pathway                                
Name
Purine metabolism - Cohnella herbarum
Class
Metabolism; Nucleotide metabolism
Pathway map
cheb00230  Purine metabolism
cheb00230

Module
cheb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cheb00230]
cheb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cheb00230]
cheb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cheb00230]
cheb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cheb00230]
cheb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cheb00230]
Other DBs
GO: 0006163 0042278
Organism
Cohnella herbarum [GN:cheb]
Gene
HH215_03460  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
HH215_03520  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
HH215_20270  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
HH215_23360  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
HH215_25755  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
HH215_17290  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
HH215_17270  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
HH215_17280  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
HH215_09985  purT; phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
HH215_17295  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
HH215_17305  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
HH215_17300  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
HH215_17285  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
HH215_17320  purK; 5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
HH215_17325  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
HH215_17310  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
HH215_17315  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
HH215_17275  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
HH215_00615  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
HH215_00735  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
HH215_03525  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
HH215_32390  pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
HH215_10585  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
HH215_23635  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
HH215_23755  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
HH215_34110  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
HH215_03965  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
HH215_01005  xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
HH215_01795  xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
HH215_09675  (2Fe-2S)-binding protein [KO:K00087] [EC:1.17.1.4]
HH215_09680  pucD; xanthine dehydrogenase subunit D [KO:K00087] [EC:1.17.1.4]
HH215_17340  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
HH215_09955  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
HH215_32285  guanylate kinase [KO:K00942] [EC:2.7.4.8]
HH215_34460  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
HH215_06320  nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
HH215_01880  adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
HH215_34465  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
HH215_06315  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
HH215_05090  dgt; dNTP triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
HH215_12685  yfbR; 5'-deoxynucleotidase [KO:K08722] [EC:3.1.3.89]
HH215_00620  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
HH215_00915  GTP pyrophosphokinase family protein [KO:K07816] [EC:2.7.6.5]
HH215_09535  GTP pyrophosphokinase family protein [KO:K07816] [EC:2.7.6.5]
HH215_22840  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
HH215_11215  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
HH215_02610  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
HH215_01700  adenine deaminase [KO:K01486] [EC:3.5.4.2]
HH215_15470  bifunctional metallophosphatase/5'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
HH215_12145  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
HH215_09035  TIGR00282 family metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
HH215_19085  adenylate kinase [KO:K00939] [EC:2.7.4.3]
HH215_19430  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
HH215_20165  cysC; adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
HH215_19020  sat; sulfate adenylyltransferase [KO:K00958] [EC:2.7.7.4]
HH215_09665  pucL; urate oxidase [KO:K16838] [EC:1.7.3.3 4.1.1.97]
HH215_09660  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
HH215_23915  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K13485] [EC:4.1.1.97]
HH215_09670  uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [KO:K13485] [EC:4.1.1.97]
HH215_30445  allB; allantoinase AllB [KO:K01466] [EC:3.5.2.5]
HH215_23920  Zn-dependent hydrolase [KO:K02083] [EC:3.5.3.9]
HH215_09655  Zn-dependent hydrolase [KO:K02083] [EC:3.5.3.9]
HH215_23925  alanine--glyoxylate aminotransferase family protein [KO:K00839] [EC:2.6.1.112]
HH215_09650  alanine--glyoxylate aminotransferase family protein [KO:K00839] [EC:2.6.1.112]
HH215_11365  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
HH215_11370  urease subunit beta [KO:K01429] [EC:3.5.1.5]
HH215_11375  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
cheb00030  Pentose phosphate pathway
cheb00220  Arginine biosynthesis
cheb00250  Alanine, aspartate and glutamate metabolism
cheb00260  Glycine, serine and threonine metabolism
cheb00340  Histidine metabolism
cheb00630  Glyoxylate and dicarboxylate metabolism
cheb00730  Thiamine metabolism
cheb00740  Riboflavin metabolism
cheb00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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