KEGG   PATHWAY: ctig03082
Entry
ctig03082                   Pathway                                
Name
ATP-dependent chromatin remodeling - Crotalus tigris (Tiger rattlesnake)
Class
Genetic Information Processing; Chromosome
Pathway map
ctig03082  ATP-dependent chromatin remodeling
ctig03082

Organism
Crotalus tigris (Tiger rattlesnake) [GN:ctig]
Gene
120306202  SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [KO:K11654] [EC:5.6.2.-]
120311826  BAZ1A; bromodomain adjacent to zinc finger domain protein 1A isoform X1 [KO:K11655]
120309212  BAZ1B; tyrosine-protein kinase BAZ1B [KO:K11658]
120305458  BAZ2A; bromodomain adjacent to zinc finger domain protein 2A isoform X1 [KO:K15224]
120301315  BAZ2B; bromodomain adjacent to zinc finger domain protein 2B isoform X1 [KO:K26167]
120304229  CHRAC1; chromatin accessibility complex protein 1 [KO:K11656]
120308623  POLE3; DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
120320161  RSF1; remodeling and spacing factor 1 isoform X1 [KO:K11657]
120310386  SMARCA1; probable global transcription activator SNF2L1 [KO:K11727] [EC:5.6.2.-]
120300600  BPTF; nucleosome-remodeling factor subunit BPTF isoform X1 [KO:K11728]
120301365  RBBP4; histone-binding protein RBBP4 isoform X1 [KO:K10752]
120299714  CUNH17orf49; chromatin complexes subunit BAP18 isoform X1 [KO:K23406]
120316783  cat eye syndrome critical region protein 2 [KO:K25830]
120305728  CHD3; LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 3 [KO:K11642] [EC:5.6.2.-]
120306086  CHD4; chromodomain-helicase-DNA-binding protein 4 isoform X1 [KO:K11643] [EC:5.6.2.-]
120305212  HDAC2; histone deacetylase 2 [KO:K06067] [EC:3.5.1.98]
120301798  HDAC1; histone deacetylase 1 [KO:K06067] [EC:3.5.1.98]
120298345  MBD2; methyl-CpG-binding domain protein 2 [KO:K11590]
120301356  MBD3; methyl-CpG-binding domain protein 3 isoform X1 [KO:K11591]
120316944  MTA2; metastasis-associated protein MTA2 isoform X1 [KO:K11660]
120301926  MTA3; metastasis-associated protein MTA3 [KO:K11660]
120317029  GATAD2B; transcriptional repressor p66-beta isoform X1 [KO:K23194]
120303464  GATAD2A; transcriptional repressor p66-alpha isoform X1 [KO:K23194]
120313180  PHF6; PHD finger protein 6 isoform X1 [KO:K23310]
120316758  CDK2AP1; cyclin-dependent kinase 2-associated protein 1 isoform X1 [KO:K26454]
120308301  CDK2AP2; cyclin-dependent kinase 2-associated protein 2 isoform X1 [KO:K26455]
120317694  SMARCA2; probable global transcription activator SNF2L2 isoform X1 [KO:K11647] [EC:5.6.2.-]
120305438  SMARCA4; transcription activator BRG1 isoform X1 [KO:K11647] [EC:5.6.2.-]
120314626  SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 [KO:K11648]
120300565  SMARCC2; SWI/SNF complex subunit SMARCC2 isoform X1 [KO:K11649]
120320117  SMARCC1; SWI/SNF complex subunit SMARCC1 [KO:K11649]
120298522  SMARCD3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1 [KO:K11650]
120316061  SMARCD2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 [KO:K11650]
120316548  SMARCD1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1 [KO:K11650]
120312799  SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 [KO:K11651]
120305545  actin, clone 302-like [KO:K05692]
120309394  ACTG1; actin, cytoplasmic 2 [KO:K05692]
120315823  ACTB; actin, cytoplasmic 1 [KO:K05692]
120313493  ACTL6A; actin-like protein 6A isoform X1 [KO:K11340]
120299726  ACTL6B; actin-like protein 6B [KO:K11652]
120302326  BCL7C; B-cell CLL/lymphoma 7 protein family member C [KO:K25605]
120309217  BCL7B; B-cell CLL/lymphoma 7 protein family member B [KO:K25605]
120316747  BCL7A; B-cell CLL/lymphoma 7 protein family member A [KO:K25605]
120301383  SS18; protein SSXT isoform X1 [KO:K15623]
120309350  SS18L1; calcium-responsive transactivator isoform X1 [KO:K15623]
120314804  ARID1B; AT-rich interactive domain-containing protein 1B isoform X1 [KO:K11653]
120304082  ARID1A; AT-rich interactive domain-containing protein 1A [KO:K11653]
120303874  DPF3; zinc finger protein DPF3 isoform X1 [KO:K22198]
120316377  DPF1; zinc finger protein neuro-d4 isoform X1 [KO:K22198]
120318559  DPF2; zinc finger protein ubi-d4 isoform X1 [KO:K13196]
120313407  ARID2; AT-rich interactive domain-containing protein 2 isoform X1 [KO:K11765]
120312759  PBRM1; protein polybromo-1 isoform X1 [KO:K11757]
120312118  BRD7; bromodomain-containing protein 7 [KO:K11723]
120310488  PHF10; PHD finger protein 10 isoform X1 [KO:K22197]
120310062  BRD9; bromodomain-containing protein 9 isoform X1 [KO:K22184]
120319852  BICRA; BRD4-interacting chromatin-remodeling complex-associated protein isoform X1 [KO:K25612]
120309949  BICRAL; BRD4-interacting chromatin-remodeling complex-associated protein-like isoform X1 [KO:K25613]
120299258  INO80; LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80 [KO:K11665] [EC:5.6.2.-]
120303934  INO80B; INO80 complex subunit B [KO:K11666]
120303099  INO80C; INO80 complex subunit C [KO:K11667]
120312306  INO80D; INO80 complex subunit D [KO:K11668]
120302240  INO80E; INO80 complex subunit E isoform X1 [KO:K11669]
120304465  TFPT; TCF3 fusion partner isoform X1 [KO:K11670]
120304215  NFRKB; nuclear factor related to kappa-B-binding protein isoform X1 [KO:K11671]
120306219  MCRS1; microspherule protein 1 [KO:K11674]
120316576  UCHL5; ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1 [KO:K05610] [EC:3.4.19.12]
120314363  RUVBL1; ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
120315587  RUVBL2; ruvB-like 2 [KO:K11338] [EC:5.6.2.3]
120299175  ACTR5; actin-related protein 5 [KO:K11672]
120315889  ACTR8; actin-related protein 8 [KO:K11673]
120306438  YY1; transcriptional repressor protein YY1 isoform X1 [KO:K09201]
120302320  helicase SRCAP isoform X1 [KO:K11661] [EC:5.6.2.-]
120298958  DMAP1; DNA methyltransferase 1-associated protein 1 [KO:K11324]
120308443  YEATS4; YEATS domain-containing protein 4 [KO:K11341]
120317220  VPS72; vacuolar protein sorting-associated protein 72 homolog [KO:K11664]
120317482  histone H2A type 2-C-like [KO:K11251]
120305757  histone H2A-IV-like [KO:K11251]
120305758  histone H2A type 1-H [KO:K11251]
120312197  histone H2A type 2-C [KO:K11251]
120312198  histone H2A type 2-B [KO:K11251]
120312199  histone H2A type 2-C-like [KO:K11251]
120301062  histone H2A type 2-C-like [KO:K11251]
120301082  histone H2A type 2-C-like [KO:K11251]
120313669  histone H2A, sperm-like [KO:K11251]
120314435  histone H2A-beta, sperm-like [KO:K11251]
120301968  histone H2A-beta, sperm [KO:K11251]
120308936  histone H2A type 2-B-like [KO:K11251]
120315931  histone H2A-like [KO:K11251]
120315932  histone H2A-like [KO:K11251]
120316091  histone H2A.Z [KO:K11251]
120297643  core histone macro-H2A.2 [KO:K11251]
120304378  core histone macro-H2A.1 isoform X1 [KO:K11251]
120318809  histone H2A.V [KO:K11251]
120312830  ACTR6; actin-related protein 6 isoform X1 [KO:K11662]
120301058  ZNHIT1; zinc finger HIT domain-containing protein 1 isoform X1 [KO:K11663]
120303115  EP400; E1A-binding protein p400 isoform X1 [KO:K11320] [EC:5.6.2.-]
120315678  transformation/transcription domain-associated protein isoform X1 [KO:K08874]
120316445  MORF4L1; mortality factor 4-like protein 1 isoform X1 [KO:K11339]
120314764  MRG/MORF4L-binding protein isoform X1 [KO:K11343]
120304020  BRD8; bromodomain-containing protein 8 isoform X1 [KO:K11321]
120304021  bromodomain-containing protein 8-like [KO:K11321]
120308225  ING3; inhibitor of growth protein 3 isoform X1 [KO:K11319]
120301142  EPC2; enhancer of polycomb homolog 2 isoform X1 [KO:K11322]
120308269  EPC1; enhancer of polycomb homolog 1 isoform X1 [KO:K11322]
120301611  MEAF6; chromatin modification-related protein MEAF6 isoform X1 [KO:K11344]
120318477  KAT5; histone acetyltransferase KAT5 isoform X1 [KO:K11304] [EC:2.3.1.48]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
LinkDB

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