KEGG   PATHWAY: daa00630
Entry
daa00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Frigidibacter mobilis
Class
Metabolism; Carbohydrate metabolism
Pathway map
daa00630  Glyoxylate and dicarboxylate metabolism
daa00630

Module
daa_M00373  Ethylmalonyl pathway [PATH:daa00630]
daa_M00621  Glycine cleavage system [PATH:daa00630]
daa_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:daa00630]
Other DBs
GO: 0046487 0043648
Organism
Frigidibacter mobilis [GN:daa]
Gene
AKL17_0305  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
AKL17_4474  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
AKL17_1983  malate synthase [KO:K01638] [EC:2.3.3.9]
AKL17_3634  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AKL17_1969  citrate -synthase [KO:K01647] [EC:2.3.3.1]
AKL17_4339  citrate synthase [KO:K01647] [EC:2.3.3.1]
AKL17_1681  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AKL17_3427  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AKL17_3p0178  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AKL17_3096  3-ketoacyl-CoA thiolase/acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AKL17_4662  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AKL17_0126  beta-ketothiolase [KO:K00626] [EC:2.3.1.9]
AKL17_0161  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AKL17_0160  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
AKL17_0943  MaoC domain-containing protein dehydratase [KO:K17865] [EC:4.2.1.55]
AKL17_0912  crotonyl-CoA reductase [KO:K14446] [EC:1.3.1.85]
AKL17_1163  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
AKL17_0910  methylmalonyl-CoA mutase large subunit [KO:K14447] [EC:5.4.99.63]
AKL17_0387  acyl-CoA dehydrogenase domain-containing protein [KO:K14448] [EC:1.3.8.12]
AKL17_3640  MaoC domain-containing protein [KO:K14449] [EC:4.2.1.148]
AKL17_3598  citrate -lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
AKL17_3637  citrate -lyase [KO:K14451] [EC:3.1.2.30]
AKL17_2393  propionyl-CoA carboxylase alpha subunit [KO:K01965] [EC:6.4.1.3]
AKL17_2399  carboxyl transferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
AKL17_4463  biotin carboxylase [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
AKL17_2390  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
AKL17_3142  glycolate dehydrogenase, subunit GlcD [KO:K00104] [EC:1.1.99.14]
AKL17_3141  FAD linked oxidase domain-containing protein [KO:K11472] [EC:1.1.99.14]
AKL17_3139  glycolate oxidase, iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
AKL17_0206  putative catalase [KO:K03781] [EC:1.11.1.6]
AKL17_2099  catalase [KO:K03781] [EC:1.11.1.6]
AKL17_0627  glyoxylate reductase [KO:K00015] [EC:1.1.1.26]
AKL17_3202  dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AKL17_3707  D-2-hydroxyacid dehydrogenase protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AKL17_0997  D-2-hydroxyacid dehydrogenase protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AKL17_0706  D-isomer specific 2-hydroxyacid dehydrogenase family protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AKL17_0458  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AKL17_0207  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AKL17_2335  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AKL17_2769  HAD-superfamily hydrolase, subfamily IA, variant 1 family protein [KO:K01091] [EC:3.1.3.18]
AKL17_0212  ribulose bisophosphate carboxylase [KO:K01601] [EC:4.1.1.39]
AKL17_0211  ribulose 1,5-bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
AKL17_3039  serine--glyoxylate transaminase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
AKL17_1460  glutamine synthetase-5 [KO:K01915] [EC:6.3.1.2]
AKL17_1462  glutamine synthetase-4 [KO:K01915] [EC:6.3.1.2]
AKL17_0577  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AKL17_2648  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AKL17_0200  glyA-3 [KO:K00600] [EC:2.1.2.1]
AKL17_3452  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AKL17_2919  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
AKL17_0243  sarcosine oxidase alpha subunit [KO:K00605] [EC:2.1.2.10]
AKL17_2921  glycine cleavage T protein [KO:K00605] [EC:2.1.2.10]
AKL17_0241  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
AKL17_0582  aminomethyltransferase protein [KO:K00605] [EC:2.1.2.10]
AKL17_3626  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AKL17_2795  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AKL17_2920  glycine cleavage system H protein [KO:K02437]
AKL17_3189  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
AKL17_1644  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
AKL17_3217  3-isopropylmalate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AKL17_1643  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AKL17_2489  KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AKL17_0824  NAD-dependent formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
AKL17_0823  NAD dependent formate dehydrogenase, beta subunit [KO:K00124]
AKL17_0822  formate dehydrogenase subunit gamma [KO:K00127]
AKL17_2054  hypothetical protein [KO:K01432] [EC:3.5.1.9]
AKL17_3271  hypothetical protein [KO:K01432] [EC:3.5.1.9]
AKL17_0253  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AKL17_2728  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
daa00010  Glycolysis / Gluconeogenesis
daa00020  Citrate cycle (TCA cycle)
daa00030  Pentose phosphate pathway
daa00053  Ascorbate and aldarate metabolism
daa00071  Fatty acid degradation
daa00230  Purine metabolism
daa00250  Alanine, aspartate and glutamate metabolism
daa00260  Glycine, serine and threonine metabolism
daa00620  Pyruvate metabolism
daa00710  Carbon fixation by Calvin cycle
daa00750  Vitamin B6 metabolism
daa00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system